RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 LDHCP07864 332 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 IGFBP4P22692 258 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MCAMP43121 646 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RASGRF1Q13972 1273 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ADGRE1Q14246 886 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 UBE3CQ15386 1083 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CCDC85BQ15834 202 aaPredicted RBP10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L2Q6R6M4 530 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 LBX2Q6XYB7 198 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ERICH6Q7L0X2 663 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 FERMT2Q96AC1 680 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 C12orf42Q96LP6 360 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 FSD1Q9BTV5 496 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 DHX36Q9H2U1 1008 aaKnown RBP10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 HMG20BQ9P0W2 317 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 LRP2BPQ9P2M1 347 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 NDUFB9Q9Y6M9 179 aa10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.43□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ROBO3Q96MS0 1386 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 GPR37L1O60883 481 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 REC8O95072 547 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 SDSP20132 328 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PBX2P40425 430 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MECOMQ03112 1051 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PPIGQ13427 754 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RAB30Q15771 203 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 FAM47AQ5JRC9 791 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RASIP1Q5U651 963 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ANO1Q5XXA6 986 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 DPP9Q86TI2 863 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 OTUD7AQ8TE49 926 aaPredicted RBP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TOX2Q96NM4 488 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 DNAJC2Q99543 621 aaKnown RBP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 BCL11AQ9H165 835 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 UPF2Q9HAU5 1272 aaKnown RBP10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 EMILIN3Q9NT22 766 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TMEM39AQ9NV64 488 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ZBTB21Q9ULJ3 1066 aa10.42□□□□□ -0.74
PDLIM1P3-201ENST00000582370 GOLIM4O00461 696 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 STRNO43815 780 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PQBP1O60828 265 aaKnown RBP10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PLCG2P16885 1265 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 GNAT2P19087 354 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ANKRD33Q7Z3H0 272 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 METTL16Q86W50 562 aaKnown RBP10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TEX11Q8IYF3 940 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 SLC44A5Q8NCS7 719 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ZNF384Q8TF68 577 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 EPHX3Q9H6B9 360 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 SLC5A4Q9NY91 659 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MSRAQ9UJ68 235 aa10.41□□□□□ -0.74
PDLIM1P3-201ENST00000582370 COL11A1P12107 1806 aaPredicted RBP10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 A0A1W2PQ45 241 aaPredicted RBP10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 A0A1W2PQY0 241 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RNF113AO15541 343 aaKnown RBP10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 BAG3O95817 575 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TIMP1P01033 207 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CYP2E1P05181 493 aaPredicted RBP10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RARBP10826 455 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 GSPT1P15170 499 aaKnown RBP10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ADORA2AP29274 412 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 ZAP70P43403 619 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 USP14P54578 494 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 JAG1P78504 1218 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 FAAP100Q0VG06 881 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MFSD5Q6N075 450 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 CATSPERGQ6ZRH7 1159 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 RNF180Q86T96 592 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 DNAJC18Q9H819 358 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 XPNPEP3Q9NQH7 507 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
PDLIM1P3-201ENST00000582370 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.75
PDLIM1P3-201ENST00000582370 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 MYH8P13535 1937 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 GRXCR1A8MXD5 290 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 DCDC2CA8MYV0 355 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 IDH1O75874 414 aaKnown RBP10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 GDF11O95390 407 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 NT5C2P49902 561 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 TFF2Q03403 129 aa10.39□□□□□ -0.75
PDLIM1P3-201ENST00000582370 MCMDC2Q4G0Z9 681 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms