RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ZNF365Q70YC5 407 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 NUP133Q8WUM0 1156 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 ATG4CQ96DT6 458 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 TINF2Q9BSI4 451 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 TSEN34Q9BSV6 310 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 LRFN3Q9BTN0 628 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 API5Q9BZZ5 524 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 NKX2-4Q9H2Z4 354 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 PIH1D3Q9NQM4 214 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 HCN4Q9Y3Q4 1203 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
CSNK1D-218ENST00000581655 PGK2P07205 417 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 GNAI3P08754 354 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 ZNF865P0CJ78 1059 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 PLCD1P51178 756 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 TFF2Q03403 129 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 RAB30Q15771 203 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 MICALL1Q8N3F8 863 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 DBNDD2Q9BQY9 259 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 SLC28A3Q9HAS3 691 aa15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 ARIH1Q9Y4X5 557 aaPredicted RBP15.34■□□□□ 0.05
CSNK1D-218ENST00000581655 APBB1O00213 710 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 MPHOSPH10O00566 681 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 IGSF3O75054 1194 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 FLOT1O75955 427 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 KCNA10Q16322 511 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 PSRC1Q6PGN9 363 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 TMEM199Q8N511 208 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 MMP19Q99542 508 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 PPP1R12CQ9BZL4 782 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 EPHX3Q9H6B9 360 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 YBX2Q9Y2T7 364 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 SYNRGQ9UMZ2 1314 aa15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 PRRC2BQ5JSZ5 2229 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 COL11A1P12107 1806 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-218ENST00000581655 PARP14Q460N5 1801 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 MOXD2PA6NHM9 499 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 IDH1O75874 414 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 SLC25A27O95847 323 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 KCNQ1P51787 676 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 ZNF792Q3KQV3 632 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 KLHDC9Q8NEP7 349 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 DIS3Q9Y2L1 958 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 MROH7Q68CQ1 1323 aa15.32■□□□□ 0.04
CSNK1D-218ENST00000581655 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 CDK7P50613 346 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 GABPAQ06546 454 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 KCTD2Q14681 263 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 AAK1Q2M2I8 961 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 CCSAPQ6IQ19 270 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 SPICE1Q8N0Z3 855 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 MAGEB6Q8N7X4 407 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 HERVK_113Q902F9 699 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 GLT1D1Q96MS3 346 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 CNPY2Q9Y2B0 182 aa15.31■□□□□ 0.04
CSNK1D-218ENST00000581655 TRANK1O15050 2925 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 ELP1O95163 1332 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 EVX2Q03828 476 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 SKIV2LQ15477 1246 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 NAV1Q8NEY1 1877 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 VTI1AQ96AJ9 217 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 ZNF512BQ96KM6 892 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 GPR108Q9NPR9 543 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 FAM184BQ9ULE4 1060 aa15.3■□□□□ 0.04
CSNK1D-218ENST00000581655 ANP32CO43423 234 aa15.29■□□□□ 0.04
CSNK1D-218ENST00000581655 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
CSNK1D-218ENST00000581655 RIOX2Q8IUF8 465 aa15.29■□□□□ 0.04
CSNK1D-218ENST00000581655 CLEC10AQ8IUN9 316 aa15.29■□□□□ 0.04
CSNK1D-218ENST00000581655 MTIF3Q9H2K0 278 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-218ENST00000581655 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-218ENST00000581655 ARVCFO00192 962 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 TLR3O15455 904 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 FGBP02675 491 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 ASGR1P07306 291 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 C6orf222P0C671 652 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 CYP2C18P33260 490 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 RABGGTBP53611 331 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 TMEM179Q6ZVK1 233 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 FAM126BQ8IXS8 530 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 VCPKMTQ9H867 229 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
CSNK1D-218ENST00000581655 MYH8P13535 1937 aa15.27■□□□□ 0.04
CSNK1D-218ENST00000581655 A0A0U1RQG5 324 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-218ENST00000581655 ERC2O15083 957 aa15.27■□□□□ 0.04
CSNK1D-218ENST00000581655 WDR46O15213 610 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms