RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 CRBNQ96SW2 442 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 MROH8Q9H579 483 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 IGKV6D-41A0A0C4DH26 115 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 MINDY4BA8MYZ0 360 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 AAMPQ13685 434 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 ZMYM1Q5SVZ6 1142 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 MFSD14CQ5VZR4 134 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
SENP3-204ENST00000580997 NPLOC4Q8TAT6 608 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 ATG4CQ96DT6 458 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
SENP3-204ENST00000580997 MKNK2Q9HBH9 465 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 ZNF287Q9HBT7 754 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 NYAP2Q9P242 653 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 STAP2Q9UGK3 403 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 A0A0G2JMZ2 1700 aa14.91□□□□□ -0.02
SENP3-204ENST00000580997 COL6A1P12109 1028 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 ADORA2AP29274 412 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 TDO2P48775 406 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 ATP2B2Q01814 1243 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 OLFML2BQ68BL8 750 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 DPP9Q86TI2 863 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 MKL1Q969V6 931 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 C11orf49Q9H6J7 331 aa14.9□□□□□ -0.02
SENP3-204ENST00000580997 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
SENP3-204ENST00000580997 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 F5H6K3 240 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 VWA5AO00534 786 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 COBLO75128 1261 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 SLC25A27O95847 323 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 APPP05067 770 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 KLRC3Q07444 240 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 ANKRD45Q5TZF3 282 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 TICAM2Q86XR7 235 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 ZNF444Q8N0Y2 327 aaPredicted RBP14.89□□□□□ -0.03
SENP3-204ENST00000580997 FSD1Q9BTV5 496 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 NACAP1Q9BZK3 213 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 FBXO28Q9NVF7 368 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 SYNPO2Q9UMS6 1093 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 MYH8P13535 1937 aa14.89□□□□□ -0.03
SENP3-204ENST00000580997 GREB1LQ9C091 1923 aaPredicted RBP14.89□□□□□ -0.03
SENP3-204ENST00000580997 ZNF236Q9UL36 1845 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 MSCO60682 206 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 CYP2C19P33261 490 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 PLS1Q14651 629 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 NCAPG2Q86XI2 1143 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 RIOX2Q8IUF8 465 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 REPS2Q8NFH8 660 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 DDX20Q9UHI6 824 aaKnown RBP14.88□□□□□ -0.03
SENP3-204ENST00000580997 ZNF214Q9UL59 606 aaPredicted RBP14.88□□□□□ -0.03
SENP3-204ENST00000580997 LAMA3Q16787 3333 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 PFASO15067 1338 aa14.88□□□□□ -0.03
SENP3-204ENST00000580997 FOXP2O15409 715 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 FCER1AP12319 257 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 CYBAP13498 195 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 PDE1AP54750 535 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 FAM83BQ5T0W9 1011 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 MTMR4Q9NYA4 1195 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
SENP3-204ENST00000580997 A0A1W2PPC1 479 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 PRDM1O75626 825 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 NDUFB10O96000 172 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 STAT3P40763 770 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 PDE4BQ07343 736 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 PRPF38AQ8NAV1 312 aaKnown RBP14.86□□□□□ -0.03
SENP3-204ENST00000580997 NEDD1Q8NHV4 660 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 CEP95Q96GE4 821 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 NAPBQ9H115 298 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
SENP3-204ENST00000580997 PARP14Q460N5 1801 aa14.86□□□□□ -0.03
SENP3-204ENST00000580997 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 ATP2A1O14983 1001 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 TTLL1O95922 423 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 COPB2P35606 906 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 PPARAQ07869 468 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 SMC5Q8IY18 1101 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 GMCL1P1Q8NEA9 526 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 NUP88Q99567 741 aaPredicted RBP14.85□□□□□ -0.03
SENP3-204ENST00000580997 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
SENP3-204ENST00000580997 TRIOBPQ9H2D6 2365 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 SEPT4O43236 478 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 RAD21O60216 631 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 SLC3A2P08195 630 aaKnown RBP14.84□□□□□ -0.03
SENP3-204ENST00000580997 CNGA1P29973 690 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 BMP8BP34820 402 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 C7orf61Q8IZ16 206 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 GDF15Q99988 308 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 TEX13BQ9BXU2 312 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 HELLSQ9NRZ9 838 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 NRBP1Q9UHY1 535 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 ANAPC4Q9UJX5 808 aa14.84□□□□□ -0.03
SENP3-204ENST00000580997 DIS3Q9Y2L1 958 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms