RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 FLOT1O75955 427 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 PBX2P40425 430 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 ACLYP53396 1101 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 PPIGQ13427 754 aaKnown RBP eCLIP17.86■□□□□ 0.45
IFT20-211ENST00000580991 TMED8Q6PL24 325 aaPredicted RBP17.86■□□□□ 0.45
IFT20-211ENST00000580991 MAGEB6Q8N7X4 407 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 ATG4CQ96DT6 458 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
IFT20-211ENST00000580991 DIS3Q9Y2L1 958 aaKnown RBP17.86■□□□□ 0.45
IFT20-211ENST00000580991 CHD7Q9P2D1 2997 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 MOXD2PA6NHM9 499 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 ADAMTS4O75173 837 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 POLR3DP05423 398 aaPredicted RBP17.85■□□□□ 0.45
IFT20-211ENST00000580991 GABPAQ06546 454 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 TMEM240Q5SV17 173 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 RASIP1Q5U651 963 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 MMP19Q99542 508 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 C1QTNF1Q9BXJ1 281 aa17.85■□□□□ 0.45
IFT20-211ENST00000580991 MROH7Q68CQ1 1323 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 GRXCR1A8MXD5 290 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 PGK2P07205 417 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
IFT20-211ENST00000580991 TAL1P17542 331 aaPredicted RBP17.84■□□□□ 0.45
IFT20-211ENST00000580991 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
IFT20-211ENST00000580991 OS9Q13438 667 aaPredicted RBP17.84■□□□□ 0.45
IFT20-211ENST00000580991 ADGRE1Q14246 886 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 KCTD2Q14681 263 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
IFT20-211ENST00000580991 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 C16orf59Q7L2K0 433 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
IFT20-211ENST00000580991 MSRAQ9UJ68 235 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
IFT20-211ENST00000580991 IGFBP4P22692 258 aa17.83■□□□□ 0.44
IFT20-211ENST00000580991 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.44
IFT20-211ENST00000580991 RAB30Q15771 203 aa17.83■□□□□ 0.44
IFT20-211ENST00000580991 ZNF792Q3KQV3 632 aa17.83■□□□□ 0.44
IFT20-211ENST00000580991 PSRC1Q6PGN9 363 aaPredicted RBP17.83■□□□□ 0.44
IFT20-211ENST00000580991 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.44
IFT20-211ENST00000580991 LENG1Q96BZ8 264 aaPredicted RBP17.83■□□□□ 0.44
IFT20-211ENST00000580991 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.44
IFT20-211ENST00000580991 SH2D4AQ9H788 454 aa17.83■□□□□ 0.44
IFT20-211ENST00000580991 ELP1O95163 1332 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 SYNRGQ9UMZ2 1314 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 CSF2RAP15509 400 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 KCNA10Q16322 511 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
IFT20-211ENST00000580991 SPICE1Q8N0Z3 855 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 KLHDC9Q8NEP7 349 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 ARHGEF10LQ9HCE6 1279 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 DBNLQ9UJU6 430 aaKnown RBP17.82■□□□□ 0.44
IFT20-211ENST00000580991 XIRP2A4UGR9 3374 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 PARP14Q460N5 1801 aa17.82■□□□□ 0.44
IFT20-211ENST00000580991 TCF20Q9UGU0 1960 aaKnown RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 WDR46O15213 610 aaKnown RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 RARSP54136 660 aaKnown RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 CCSAPQ6IQ19 270 aaPredicted RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 RIOX2Q8IUF8 465 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 MSL3Q8N5Y2 521 aaKnown RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 RIOK1Q9BRS2 568 aaKnown RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 VCPKMTQ9H867 229 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 CXXC1Q9P0U4 656 aaPredicted RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 FAM184BQ9ULE4 1060 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 ADAMTS5Q9UNA0 930 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 TMX2Q9Y320 296 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 NAV1Q8NEY1 1877 aa17.81■□□□□ 0.44
IFT20-211ENST00000580991 COL11A1P12107 1806 aaPredicted RBP17.81■□□□□ 0.44
IFT20-211ENST00000580991 TRANK1O15050 2925 aa17.8■□□□□ 0.44
IFT20-211ENST00000580991 REV3LO60673 3130 aa17.8■□□□□ 0.44
IFT20-211ENST00000580991 CDK7P50613 346 aa17.8■□□□□ 0.44
IFT20-211ENST00000580991 POLA2Q14181 598 aa17.8■□□□□ 0.44
IFT20-211ENST00000580991 SLC28A3Q9HAS3 691 aa17.8■□□□□ 0.44
IFT20-211ENST00000580991 ARIH1Q9Y4X5 557 aaPredicted RBP17.8■□□□□ 0.44
IFT20-211ENST00000580991 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
IFT20-211ENST00000580991 ACRP10323 421 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 COPB2P35606 906 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 STAT3P40763 770 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 ICA1Q05084 483 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 AAK1Q2M2I8 961 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 SIAH1Q8IUQ4 282 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 PCSK9Q8NBP7 692 aaKnown RBP17.79■□□□□ 0.44
IFT20-211ENST00000580991 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
IFT20-211ENST00000580991 MTIF3Q9H2K0 278 aaKnown RBP17.79■□□□□ 0.44
IFT20-211ENST00000580991 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 TLR7Q9NYK1 1049 aaKnown RBP17.79■□□□□ 0.44
IFT20-211ENST00000580991 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
IFT20-211ENST00000580991 MYH8P13535 1937 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 SYNGAP1Q96PV0 1343 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 MAGEB6P1A0A0J9YX57 407 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 APBB1O00213 710 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 IPO8O15397 1037 aaKnown RBP17.78■□□□□ 0.44
IFT20-211ENST00000580991 DUSP11O75319 330 aaKnown RBP17.78■□□□□ 0.44
IFT20-211ENST00000580991 BMP1P13497 986 aa17.78■□□□□ 0.44
IFT20-211ENST00000580991 CST5P28325 142 aaPredicted RBP17.78■□□□□ 0.44
IFT20-211ENST00000580991 EVX2Q03828 476 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms