RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
SS18-216ENST00000580751 CYP2C8P10632 490 aa18.16■□□□□ 0.5
SS18-216ENST00000580751 SLC1A4P43007 532 aa18.16■□□□□ 0.5
SS18-216ENST00000580751 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
SS18-216ENST00000580751 GTF3C2Q8WUA4 911 aaPredicted RBP18.16■□□□□ 0.5
SS18-216ENST00000580751 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
SS18-216ENST00000580751 ZSWIM6Q9HCJ5 1215 aa18.16■□□□□ 0.5
SS18-216ENST00000580751 SH2B2O14492 632 aaPredicted RBP18.15■□□□□ 0.5
SS18-216ENST00000580751 TLR2O60603 784 aa18.15■□□□□ 0.5
SS18-216ENST00000580751 BMP3P12645 472 aa18.15■□□□□ 0.5
SS18-216ENST00000580751 CASTP20810 708 aaKnown RBP18.15■□□□□ 0.5
SS18-216ENST00000580751 EXOSC10Q01780 885 aaKnown RBP18.15■□□□□ 0.5
SS18-216ENST00000580751 BECN1Q14457 450 aa18.15■□□□□ 0.5
SS18-216ENST00000580751 TMTC2Q8N394 836 aa18.15■□□□□ 0.5
SS18-216ENST00000580751 IGDCC4Q8TDY8 1250 aa18.15■□□□□ 0.5
SS18-216ENST00000580751 MYPNQ86TC9 1320 aa18.15■□□□□ 0.5
SS18-216ENST00000580751 FLOT1O75955 427 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 TBC1D8O95759 1140 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 LIFRP42702 1097 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 GCLCP48506 637 aaPredicted RBP18.14■□□□□ 0.49
SS18-216ENST00000580751 HERVK_113P62684 666 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 COG2Q14746 738 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
SS18-216ENST00000580751 NUP88Q99567 741 aaPredicted RBP18.14■□□□□ 0.49
SS18-216ENST00000580751 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.49
SS18-216ENST00000580751 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 HOXC10Q9NYD6 342 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 ISY1Q9ULR0 285 aaKnown RBP18.14■□□□□ 0.49
SS18-216ENST00000580751 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
SS18-216ENST00000580751 SNHG28P0DPA3 235 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 PDHBP11177 359 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 FGD1P98174 961 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 COL9A3Q14050 684 aaPredicted RBP18.13■□□□□ 0.49
SS18-216ENST00000580751 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 LBX2Q6XYB7 198 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 CATIPQ7Z7H3 387 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 FEM1BQ9UK73 627 aa18.13■□□□□ 0.49
SS18-216ENST00000580751 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
SS18-216ENST00000580751 CTCFP49711 727 aaPredicted RBP18.12■□□□□ 0.49
SS18-216ENST00000580751 STAT2P52630 851 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
SS18-216ENST00000580751 NFXL1Q6ZNB6 911 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 RUFY3Q7L099 469 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 SGMS1Q86VZ5 419 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 P2RX7Q99572 595 aaKnown RBP18.12■□□□□ 0.49
SS18-216ENST00000580751 SLF1Q9BQI6 1058 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 LRRC2Q9BYS8 371 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 PPP1R9AQ9ULJ8 1098 aa18.12■□□□□ 0.49
SS18-216ENST00000580751 TMEM232C9JQI7 657 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 FOXN1O15353 648 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 PLA2G6O60733 806 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 DDAH1O94760 285 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 DSG3P32926 999 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 NEK4P51957 841 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 ZNF543Q08ER8 600 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
SS18-216ENST00000580751 ANKRD1Q15327 319 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 FAM110CQ1W6H9 321 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 ASPRV1Q53RT3 343 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 C17orf99Q6UX52 265 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 KCTD1Q719H9 257 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 RASGRP2Q7LDG7 609 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 MB21D1Q8N884 522 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 CHURC1Q8WUH1 139 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 SENP2Q9HC62 589 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
SS18-216ENST00000580751 TSKSQ9UJT2 592 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 PARP14Q460N5 1801 aa18.11■□□□□ 0.49
SS18-216ENST00000580751 RLFQ13129 1914 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 A0A0G2JMZ2 1700 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 GPR25O00155 361 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
SS18-216ENST00000580751 HSPA8P11142 646 aaKnown RBP18.1■□□□□ 0.49
SS18-216ENST00000580751 BCRP11274 1271 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 CPA1P15085 419 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 PRPF38AQ8NAV1 312 aaKnown RBP18.1■□□□□ 0.49
SS18-216ENST00000580751 CHMP4CQ96CF2 233 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
SS18-216ENST00000580751 R3HDMLQ9H3Y0 253 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 FBXO28Q9NVF7 368 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 CPA4Q9UI42 421 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 RABGAP1Q9Y3P9 1069 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 SLC12A7Q9Y666 1083 aa18.1■□□□□ 0.49
SS18-216ENST00000580751 FRMPD2Q68DX3 1309 aaPredicted RBP18.09■□□□□ 0.49
SS18-216ENST00000580751 CALM1P0DP23 149 aa18.09■□□□□ 0.49
SS18-216ENST00000580751 CALM2P0DP24 149 aa18.09■□□□□ 0.49
SS18-216ENST00000580751 CALM3P0DP25 149 aa18.09■□□□□ 0.49
SS18-216ENST00000580751 TROAPQ12815 778 aa18.09■□□□□ 0.49
SS18-216ENST00000580751 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
SS18-216ENST00000580751 SYNE3Q6ZMZ3 975 aa18.09■□□□□ 0.49
SS18-216ENST00000580751 Q6ZUG5 572 aa18.09■□□□□ 0.49
SS18-216ENST00000580751 ANKRD13CQ8N6S4 541 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms