RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ORC4O43929 436 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 CNMDO75829 334 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 HMGCRP04035 888 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
NDEL1-208ENST00000580237 CYP2B6P20813 491 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 DSG3P32926 999 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 RGS2P41220 211 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 RGS19P49795 217 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 KLRC3Q07444 240 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 IKQ13123 557 aaPredicted RBP12.89□□□□□ -0.35
NDEL1-208ENST00000580237 Q3C1V9 767 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 NUP88Q99567 741 aaPredicted RBP12.89□□□□□ -0.35
NDEL1-208ENST00000580237 APBA2Q99767 749 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 SLF1Q9BQI6 1058 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
NDEL1-208ENST00000580237 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 ZNF213O14771 459 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
NDEL1-208ENST00000580237 CCL5P13501 91 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 MTFR1Q15390 333 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
NDEL1-208ENST00000580237 AKNAD1Q5T1N1 836 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 SPATC1LQ9H0A9 340 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 MYH6P13533 1939 aa12.88□□□□□ -0.35
NDEL1-208ENST00000580237 NMT2O60551 498 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 SLFN13Q68D06 897 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 TBC1D10CQ8IV04 446 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 NKX2-3Q8TAU0 364 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 MOV10L1Q9BXT6 1211 aaKnown RBP12.87□□□□□ -0.35
NDEL1-208ENST00000580237 UNC93B1Q9H1C4 597 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 NEDD4P46934 1319 aa12.87□□□□□ -0.35
NDEL1-208ENST00000580237 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 BMP3P12645 472 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 ERCC3P19447 782 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 EN2P19622 333 aaPredicted RBP12.86□□□□□ -0.35
NDEL1-208ENST00000580237 SLC1A4P43007 532 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 MAP2K5Q13163 448 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 TRMT44Q8IYL2 757 aaKnown RBP12.86□□□□□ -0.35
NDEL1-208ENST00000580237 SHCBP1Q8NEM2 672 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 TRIB2Q92519 343 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 ESR2Q92731 530 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
NDEL1-208ENST00000580237 VWA5AO00534 786 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 CENPBP07199 599 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-208ENST00000580237 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
NDEL1-208ENST00000580237 PTPREP23469 700 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 CHMLP26374 656 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 COPB2P35606 906 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 STAT2P52630 851 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 MORN1Q5T089 497 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
NDEL1-208ENST00000580237 MKL1Q969V6 931 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 MROH8Q9H579 483 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 SLC5A4Q9NY91 659 aa12.85□□□□□ -0.35
NDEL1-208ENST00000580237 CENPFP49454 3210 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 TMEM232C9JQI7 657 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 ZBED4O75132 1171 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 SLC25A27O95847 323 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 GJB1P08034 283 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 FGRP09769 529 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 FCER1AP12319 257 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
NDEL1-208ENST00000580237 MCCP23508 829 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 ADORA2AP29274 412 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 STAT3P40763 770 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 GRB14Q14449 540 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 KCTD2Q14681 263 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 MFSD14CQ5VZR4 134 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
NDEL1-208ENST00000580237 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 CPXCR1Q8N123 301 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 DEFB118Q96PH6 123 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 TEX13BQ9BXU2 312 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.84□□□□□ -0.35
NDEL1-208ENST00000580237 IL25Q9H293 177 aa12.84□□□□□ -0.35
NDEL1-208ENST00000580237 HMX1Q9NP08 348 aaPredicted RBP12.84□□□□□ -0.35
NDEL1-208ENST00000580237 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms