RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 IRX5P78411 483 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 PPP2R2DQ66LE6 453 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 HERVK_113Q902F9 699 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SERPINB13Q9UIV8 391 aa16.14■□□□□ 0.17
CDK5RAP3-213ENST00000579605 NCOR1O75376 2440 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 A0A1W2PRG0 241 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MYADML2A6NDP7 307 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MPHOSPH10O00566 681 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SRGAP3O43295 1099 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 GPR37L1O60883 481 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 DSG3P32926 999 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MIGA1Q8NAN2 632 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ATG4CQ96DT6 458 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 GLT1D1Q96MS3 346 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CNPY2Q9Y2B0 182 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SYNRGQ9UMZ2 1314 aa16.13■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CHD9Q3L8U1 2897 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 FLOT1O75955 427 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CYP7A1P22680 504 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CDK7P50613 346 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MB21D1Q8N884 522 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 KLHDC9Q8NEP7 349 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CERS4Q9HA82 394 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MYO9BQ13459 2157 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 TLL1O43897 1013 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CYP2E1P05181 493 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MRE11P49959 708 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 KCTD2Q14681 263 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 KIAA1755Q5JYT7 1200 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SPICE1Q8N0Z3 855 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SNX27Q96L92 541 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MEIS3Q99687 375 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ZNF521Q96K83 1311 aa16.11■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SMIM22K7EJ46 135 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 TLR3O15455 904 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 GTPBP6O43824 516 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ASGR1P07306 291 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 C6orf222P0C671 652 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SHMT1P34896 483 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 PLCD1P51178 756 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 KRT40Q6A162 431 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CCSAPQ6IQ19 270 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 UIMC1Q96RL1 719 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 EHD4Q9H223 541 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 MTCH2Q9Y6C9 303 aa16.1■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ZBBXA8MT70 800 aa16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ARVCFO00192 962 aa16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SLC25A27O95847 323 aa16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 CCL23P55773 120 aa16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 ELP1O95163 1332 aa16.09■□□□□ 0.17
CDK5RAP3-213ENST00000579605 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ZAP70P43403 619 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CCDC158Q5M9N0 1113 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 FAM126BQ8IXS8 530 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 COG5Q9UP83 839 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 UMODL1Q5DID0 1318 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.16
CDK5RAP3-213ENST00000579605 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 IDH1O75874 414 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 PCSK9Q8NBP7 692 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 HLA-CQ95604 372 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 HIPK3Q9H422 1215 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 SPC25Q9HBM1 224 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CD320Q9NPF0 282 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 DIS3Q9Y2L1 958 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 PCDHA11Q9Y5I1 949 aa16.07■□□□□ 0.16
CDK5RAP3-213ENST00000579605 PI4K2BG5E9Z4 385 aa16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 DUSP11O75319 330 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 EVX2Q03828 476 aa16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CLEC10AQ8IUN9 316 aa16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 DBNDD2Q9BQY9 259 aa16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 NOB1Q9ULX3 412 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-213ENST00000579605 REV3LO60673 3130 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 EPOPA6NHQ4 379 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CA3P07451 260 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ATP2A2P16615 1042 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 STAT3P40763 770 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms