RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 VCPKMTQ9H867 229 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 AS3MTQ9HBK9 375 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 GPCPD1Q9NPB8 672 aa16.12■□□□□ 0.17
TSEN54-206ENST00000579449 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
TSEN54-206ENST00000579449 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 UBE2Q2LH0YL09 131 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 KIF3CO14782 793 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
TSEN54-206ENST00000579449 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
TSEN54-206ENST00000579449 FDPSP14324 419 aaKnown RBP16.11■□□□□ 0.17
TSEN54-206ENST00000579449 SLC1A4P43007 532 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 GMCL1Q96IK5 515 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 CLMNQ96JQ2 1002 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
TSEN54-206ENST00000579449 USP17L10C9JJH3 530 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 CELF2O95319 508 aaKnown RBP16.1■□□□□ 0.17
TSEN54-206ENST00000579449 SPP2Q13103 211 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 GPATCH4Q5T3I0 446 aaKnown RBP16.1■□□□□ 0.17
TSEN54-206ENST00000579449 LDLRAD1Q5T700 205 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 ZNF280CQ8ND82 737 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
TSEN54-206ENST00000579449 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 KIAA1683Q9H0B3 1180 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 CPVLQ9H3G5 476 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 ELP3Q9H9T3 547 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 GBA2Q9HCG7 927 aaPredicted RBP16.1■□□□□ 0.17
TSEN54-206ENST00000579449 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
TSEN54-206ENST00000579449 CIZ1Q9ULV3 898 aaPredicted RBP16.1■□□□□ 0.17
TSEN54-206ENST00000579449 STK36Q9NRP7 1315 aa16.1■□□□□ 0.17
TSEN54-206ENST00000579449 PTPRFP10586 1907 aa16.09■□□□□ 0.17
TSEN54-206ENST00000579449 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
TSEN54-206ENST00000579449 BMP3P12645 472 aa16.09■□□□□ 0.17
TSEN54-206ENST00000579449 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
TSEN54-206ENST00000579449 MTMR2Q13614 643 aa16.09■□□□□ 0.17
TSEN54-206ENST00000579449 LARP1BQ659C4 914 aaKnown RBP16.09■□□□□ 0.17
TSEN54-206ENST00000579449 SPZ1Q9BXG8 430 aa16.09■□□□□ 0.17
TSEN54-206ENST00000579449 RNF26Q9BY78 433 aaPredicted RBP16.09■□□□□ 0.17
TSEN54-206ENST00000579449 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
TSEN54-206ENST00000579449 AFG3L2Q9Y4W6 797 aa16.09■□□□□ 0.17
TSEN54-206ENST00000579449 V9GY48 417 aaPredicted RBP16.09■□□□□ 0.17
TSEN54-206ENST00000579449 hCG_1642624A0A1W2PR95 340 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 CYTH3O43739 400 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 SYT1P21579 422 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 SMARCA1P28370 1054 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 FOSBP53539 338 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 BACE1P56817 501 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 FKBP1BP68106 108 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 FAM83BQ5T0W9 1011 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 ERO1BQ86YB8 467 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 C2orf69Q8N8R5 385 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
TSEN54-206ENST00000579449 UNCXA6NJT0 531 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 DEXIO95424 95 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 PDCP20941 246 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 SLC16A2P36021 539 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 USP14P54578 494 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 DGKZQ13574 1117 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 PKP1Q13835 747 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 PKN1Q16512 942 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 CST9Q5W186 159 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 LPAR1Q92633 364 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 AIFM3Q96NN9 605 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 RIOX1Q9H6W3 641 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
TSEN54-206ENST00000579449 SPDYE5A6NIY4 337 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 C19orf81C9J6K1 198 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 TMEM232C9JQI7 657 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 STX6O43752 255 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 NUCB2P80303 420 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 PPATQ06203 517 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 WASF1Q92558 559 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 SLC10A4Q96EP9 437 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
TSEN54-206ENST00000579449 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
TSEN54-206ENST00000579449 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 WDR46O15213 610 aaKnown RBP16.05■□□□□ 0.16
TSEN54-206ENST00000579449 YY1P25490 414 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 HMGCS2P54868 508 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
TSEN54-206ENST00000579449 SH3D19Q5HYK7 790 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 SYDE2Q5VT97 1194 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 BTNL9Q6UXG8 535 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 SMC1BQ8NDV3 1235 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 RBM46Q8TBY0 533 aaKnown RBP16.05■□□□□ 0.16
TSEN54-206ENST00000579449 OPTNQ96CV9 577 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
TSEN54-206ENST00000579449 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms