RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 HAND2P61296 217 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 PLS1Q14651 629 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 TTC22Q5TAA0 569 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 USP6NLQ92738 828 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 SPATC1LQ9H0A9 340 aa31.84■■■□□ 2.69
LINC00271-205ENST00000579339 GJB1P08034 283 aa31.83■■■□□ 2.69
LINC00271-205ENST00000579339 MB21D1Q8N884 522 aa31.83■■■□□ 2.69
LINC00271-205ENST00000579339 TSPY2A6NKD2 308 aa31.82■■■□□ 2.68
LINC00271-205ENST00000579339 RANBP6O60518 1105 aaKnown RBP31.82■■■□□ 2.68
LINC00271-205ENST00000579339 PTPREP23469 700 aa31.82■■■□□ 2.68
LINC00271-205ENST00000579339 RGS2P41220 211 aa31.82■■■□□ 2.68
LINC00271-205ENST00000579339 MKL1Q969V6 931 aa31.82■■■□□ 2.68
LINC00271-205ENST00000579339 PPP1R9AQ9ULJ8 1098 aa31.82■■■□□ 2.68
LINC00271-205ENST00000579339 ZMYM6O95789 1325 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 MYH4Q9Y623 1939 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 HIP1O00291 1037 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 NMT2O60551 498 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 MFAP1P55081 439 aaKnown RBP31.81■■■□□ 2.68
LINC00271-205ENST00000579339 CCL14Q16627 93 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 TOMM22Q9NS69 142 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 PARP14Q460N5 1801 aa31.81■■■□□ 2.68
LINC00271-205ENST00000579339 XRCC5P13010 732 aaKnown RBP31.8■■■□□ 2.68
LINC00271-205ENST00000579339 GJA8P48165 433 aa31.8■■■□□ 2.68
LINC00271-205ENST00000579339 MAP2K5Q13163 448 aa31.8■■■□□ 2.68
LINC00271-205ENST00000579339 TMEM132BQ14DG7 1078 aa31.8■■■□□ 2.68
LINC00271-205ENST00000579339 RRP12Q5JTH9 1297 aaKnown RBP31.8■■■□□ 2.68
LINC00271-205ENST00000579339 APBA2Q99767 749 aa31.8■■■□□ 2.68
LINC00271-205ENST00000579339 IVNS1ABPQ9Y6Y0 642 aa31.8■■■□□ 2.68
LINC00271-205ENST00000579339 ORC4O43929 436 aa31.79■■■□□ 2.68
LINC00271-205ENST00000579339 ZKSCAN1P17029 563 aaPredicted RBP31.79■■■□□ 2.68
LINC00271-205ENST00000579339 ERCC3P19447 782 aa31.79■■■□□ 2.68
LINC00271-205ENST00000579339 U2AF1L4Q8WU68 220 aaKnown RBP31.79■■■□□ 2.68
LINC00271-205ENST00000579339 CHMP4CQ96CF2 233 aa31.79■■■□□ 2.68
LINC00271-205ENST00000579339 NBPF3Q9H094 633 aa31.79■■■□□ 2.68
LINC00271-205ENST00000579339 IL17RBQ9NRM6 502 aa31.79■■■□□ 2.68
LINC00271-205ENST00000579339 SLC15A5A6NIM6 579 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 GRB14Q14449 540 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 NCAPG2Q86XI2 1143 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 NKX2-3Q8TAU0 364 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 DEFB118Q96PH6 123 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 SLF1Q9BQI6 1058 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.78■■■□□ 2.68
LINC00271-205ENST00000579339 IL25Q9H293 177 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 ADAMTS5Q9UNA0 930 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 STX8Q9UNK0 236 aa31.78■■■□□ 2.68
LINC00271-205ENST00000579339 VWA5AO00534 786 aa31.77■■■□□ 2.68
LINC00271-205ENST00000579339 FGRP09769 529 aa31.77■■■□□ 2.68
LINC00271-205ENST00000579339 SLFN13Q68D06 897 aa31.77■■■□□ 2.68
LINC00271-205ENST00000579339 TBC1D10CQ8IV04 446 aa31.77■■■□□ 2.68
LINC00271-205ENST00000579339 SHCBP1Q8NEM2 672 aa31.77■■■□□ 2.68
LINC00271-205ENST00000579339 PAK6Q9NQU5 681 aaPredicted RBP31.77■■■□□ 2.68
LINC00271-205ENST00000579339 GMCL1P1Q8NEA9 526 aa31.76■■■□□ 2.67
LINC00271-205ENST00000579339 SYNPO2Q9UMS6 1093 aa31.76■■■□□ 2.67
LINC00271-205ENST00000579339 SGPL1O95470 568 aa31.75■■■□□ 2.67
LINC00271-205ENST00000579339 PRKAR2AP13861 404 aaKnown RBP31.75■■■□□ 2.67
LINC00271-205ENST00000579339 REPS2Q8NFH8 660 aa31.75■■■□□ 2.67
LINC00271-205ENST00000579339 FLRT1Q9NZU1 646 aa31.75■■■□□ 2.67
LINC00271-205ENST00000579339 ISY1Q9ULR0 285 aaKnown RBP31.75■■■□□ 2.67
LINC00271-205ENST00000579339 NPLOC4Q8TAT6 608 aa31.74■■■□□ 2.67
LINC00271-205ENST00000579339 KIFC2Q96AC6 838 aa31.74■■■□□ 2.67
LINC00271-205ENST00000579339 COL11A1P12107 1806 aaPredicted RBP31.74■■■□□ 2.67
LINC00271-205ENST00000579339 ADORA2AP29274 412 aa31.73■■■□□ 2.67
LINC00271-205ENST00000579339 AKNAD1Q5T1N1 836 aa31.73■■■□□ 2.67
LINC00271-205ENST00000579339 MAP3K21Q5TCX8 1036 aa31.73■■■□□ 2.67
LINC00271-205ENST00000579339 RASGRP2Q7LDG7 609 aa31.73■■■□□ 2.67
LINC00271-205ENST00000579339 TRMT44Q8IYL2 757 aaKnown RBP31.73■■■□□ 2.67
LINC00271-205ENST00000579339 MROH8Q9H579 483 aa31.73■■■□□ 2.67
LINC00271-205ENST00000579339 HMX1Q9NP08 348 aaPredicted RBP31.73■■■□□ 2.67
LINC00271-205ENST00000579339 ZNF214Q9UL59 606 aaPredicted RBP31.73■■■□□ 2.67
LINC00271-205ENST00000579339 RPTORQ8N122 1335 aa31.73■■■□□ 2.67
LINC00271-205ENST00000579339 BMP3P12645 472 aa31.72■■■□□ 2.67
LINC00271-205ENST00000579339 CACNB2Q08289 660 aaPredicted RBP31.72■■■□□ 2.67
LINC00271-205ENST00000579339 MFSD6Q6ZSS7 791 aa31.72■■■□□ 2.67
LINC00271-205ENST00000579339 STAG1Q8WVM7 1258 aa31.72■■■□□ 2.67
LINC00271-205ENST00000579339 MTMR7Q9Y216 660 aa31.72■■■□□ 2.67
LINC00271-205ENST00000579339 ZNF213O14771 459 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 TFRCP02786 760 aaKnown RBP31.71■■■□□ 2.67
LINC00271-205ENST00000579339 STAT3P40763 770 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 PPP4R3BQ5MIZ7 849 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 DPP9Q86TI2 863 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 RIOX2Q8IUF8 465 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 PRPF38AQ8NAV1 312 aaKnown RBP31.71■■■□□ 2.67
LINC00271-205ENST00000579339 DSCC1Q9BVC3 393 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 FEM1BQ9UK73 627 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 NEDD4P46934 1319 aa31.71■■■□□ 2.67
LINC00271-205ENST00000579339 SLC25A27O95847 323 aa31.7■■■□□ 2.67
LINC00271-205ENST00000579339 HOXC6P09630 235 aa31.7■■■□□ 2.67
LINC00271-205ENST00000579339 MCCP23508 829 aa31.7■■■□□ 2.67
LINC00271-205ENST00000579339 TMEM232C9JQI7 657 aa31.69■■■□□ 2.66
LINC00271-205ENST00000579339 STRNO43815 780 aa31.69■■■□□ 2.66
LINC00271-205ENST00000579339 COBLO75128 1261 aa31.69■■■□□ 2.66
LINC00271-205ENST00000579339 SLC1A4P43007 532 aa31.69■■■□□ 2.66
LINC00271-205ENST00000579339 SKAP1Q86WV1 359 aa31.69■■■□□ 2.66
LINC00271-205ENST00000579339 GMCL1Q96IK5 515 aa31.69■■■□□ 2.66
LINC00271-205ENST00000579339 CHMLP26374 656 aa31.68■■■□□ 2.66
LINC00271-205ENST00000579339 CCND3P30281 292 aaPredicted RBP31.68■■■□□ 2.66
LINC00271-205ENST00000579339 NOVP48745 357 aa31.68■■■□□ 2.66
LINC00271-205ENST00000579339 SLC4A3P48751 1232 aa31.68■■■□□ 2.66
LINC00271-205ENST00000579339 CPXCR1Q8N123 301 aa31.68■■■□□ 2.66
LINC00271-205ENST00000579339 CRISPLD2Q9H0B8 497 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms