RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 DSG3P32926 999 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 SHMT1P34896 483 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 KCNQ1P51787 676 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 NKX2-4Q9H2Z4 354 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 GBF1Q92538 1859 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 SYNRGQ9UMZ2 1314 aa16.95■□□□□ 0.3
CSNK1D-211ENST00000579316 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-211ENST00000579316 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
CSNK1D-211ENST00000579316 GPR37L1O60883 481 aa16.94■□□□□ 0.3
CSNK1D-211ENST00000579316 CERS3Q8IU89 383 aa16.94■□□□□ 0.3
CSNK1D-211ENST00000579316 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-211ENST00000579316 MEIS3Q99687 375 aa16.94■□□□□ 0.3
CSNK1D-211ENST00000579316 SLC25A27O95847 323 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 ACRP10323 421 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 CST5P28325 142 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 DYNLL1P63167 89 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 SEPT2Q15019 361 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 ZNF792Q3KQV3 632 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 TTC6Q86TZ1 520 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 MTIF3Q9H2K0 278 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 IL23AQ9NPF7 189 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 C11orf16Q9NQ32 467 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 SNRKQ9NRH2 765 aa16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 MYO5AQ9Y4I1 1855 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-211ENST00000579316 PARP14Q460N5 1801 aa16.92■□□□□ 0.3
CSNK1D-211ENST00000579316 POU3F3P20264 500 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-211ENST00000579316 PLS1Q14651 629 aa16.92■□□□□ 0.3
CSNK1D-211ENST00000579316 KCNA10Q16322 511 aa16.92■□□□□ 0.3
CSNK1D-211ENST00000579316 ATG4CQ96DT6 458 aa16.92■□□□□ 0.3
CSNK1D-211ENST00000579316 GLT1D1Q96MS3 346 aa16.92■□□□□ 0.3
CSNK1D-211ENST00000579316 PGK2P07205 417 aa16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 GABPAQ06546 454 aa16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 KIAA1755Q5JYT7 1200 aa16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 FAM126BQ8IXS8 530 aa16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 MMP19Q99542 508 aa16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
CSNK1D-211ENST00000579316 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 ARVCFO00192 962 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 FLOT1O75955 427 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 USP5P45974 858 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 PIH1D3Q9NQM4 214 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 SMC4Q9NTJ3 1288 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 ADAMTS5Q9UNA0 930 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 COG5Q9UP83 839 aa16.9■□□□□ 0.3
CSNK1D-211ENST00000579316 BRWD1Q9NSI6 2320 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 MYADML2A6NDP7 307 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 TLL1O43897 1013 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 DUSP11O75319 330 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 CYP7A1P22680 504 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 PLCD1P51178 756 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 KCTD2Q14681 263 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 ALYREFQ86V81 257 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 RIOX2Q8IUF8 465 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 MICALL1Q8N3F8 863 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 GPR108Q9NPR9 543 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
CSNK1D-211ENST00000579316 E9PSI1 815 aa16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 CD4P01730 458 aa16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 FGBP02675 491 aa16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 GNAI3P08754 354 aa16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 MTCH2Q9Y6C9 303 aa16.88■□□□□ 0.29
CSNK1D-211ENST00000579316 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 APBB1O00213 710 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 TLR3O15455 904 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 ASGR1P07306 291 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 CYP2C18P33260 490 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 COPB2P35606 906 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 ZAP70P43403 619 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 CCDC158Q5M9N0 1113 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 MIGA1Q8NAN2 632 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 KHSRPQ92945 711 aaKnown RBP eCLIP16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 DBNDD2Q9BQY9 259 aa16.87■□□□□ 0.29
CSNK1D-211ENST00000579316 WDR46O15213 610 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 SNAI1O95863 264 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 RABGGTBP53611 331 aa16.86■□□□□ 0.29
CSNK1D-211ENST00000579316 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms