RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
SLC6A4-205ENST00000579221 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 TLR2O60603 784 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 CYP2C8P10632 490 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 CPA1P15085 419 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 CRHR2Q13324 411 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 COL9A3Q14050 684 aaPredicted RBP18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 CATIPQ7Z7H3 387 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 SMCR8Q8TEV9 937 aaPredicted RBP18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 CHMP4CQ96CF2 233 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 LY9Q9HBG7 655 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 FEM1BQ9UK73 627 aa18.22■□□□□ 0.51
SLC6A4-205ENST00000579221 FLOT1O75955 427 aa18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 GCLCP48506 637 aaPredicted RBP18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 CCDC96Q2M329 555 aa18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 SYNE3Q6ZMZ3 975 aa18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 GTF3C2Q8WUA4 911 aaPredicted RBP18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 GPHNQ9NQX3 736 aaPredicted RBP18.21■□□□□ 0.51
SLC6A4-205ENST00000579221 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 PDHBP11177 359 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 DSG3P32926 999 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 RBM25P49756 843 aaKnown RBP18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 HERVK_113P62684 666 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 Q6ZUG5 572 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 FAM160B2Q86V87 743 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 PRPF38AQ8NAV1 312 aaKnown RBP18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 SENP2Q9HC62 589 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 PDRG1Q9NUG6 133 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 MYPNQ86TC9 1320 aa18.2■□□□□ 0.5
SLC6A4-205ENST00000579221 PLA2G6O60733 806 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 SNHG28P0DPA3 235 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 SGMS1Q86VZ5 419 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 SLF1Q9BQI6 1058 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 R3HDMLQ9H3Y0 253 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
SLC6A4-205ENST00000579221 LOC285556D6RIA3 1793 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 PARP1P09874 1014 aaKnown RBP18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 CALM1P0DP23 149 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 CALM2P0DP24 149 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 CALM3P0DP25 149 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 STAT2P52630 851 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 ZNF543Q08ER8 600 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 ASPRV1Q53RT3 343 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 C17orf99Q6UX52 265 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 LBX2Q6XYB7 198 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 ZNF654Q8IZM8 581 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 KIFC2Q96AC6 838 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 FBXO28Q9NVF7 368 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 CPA4Q9UI42 421 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 PPP1R9AQ9ULJ8 1098 aa18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 CTDP1Q9Y5B0 961 aaPredicted RBP18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 FRMPD2Q68DX3 1309 aaPredicted RBP18.18■□□□□ 0.5
SLC6A4-205ENST00000579221 PTPRFP10586 1907 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 SPDYE16A6NNV3 312 aaPredicted RBP18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 GPR25O00155 361 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 DDAH1O94760 285 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 FDX1P10109 184 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 CTCFP49711 727 aaPredicted RBP18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 TROAPQ12815 778 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 NOM1Q5C9Z4 860 aaKnown RBP18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 ANKRD13CQ8N6S4 541 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 MB21D1Q8N884 522 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 NUP133Q8WUM0 1156 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 RABGAP1Q9Y3P9 1069 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
SLC6A4-205ENST00000579221 FOXN1O15353 648 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 ZBED4O75132 1171 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 GOLGA8HP0CJ92 632 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 GRM4Q14833 912 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 TTBK2Q6IQ55 1244 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 BTNL9Q6UXG8 535 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 GPRC5AQ8NFJ5 357 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 BRF1Q92994 677 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 ATG4CQ96DT6 458 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 AGXT2Q9BYV1 514 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 ALDH8A1Q9H2A2 487 aaPredicted RBP18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 RBPJLQ9UBG7 517 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 ADAMTS5Q9UNA0 930 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 ADGRA2Q96PE1 1338 aa18.16■□□□□ 0.5
SLC6A4-205ENST00000579221 VWA5AO00534 786 aa18.15■□□□□ 0.5
SLC6A4-205ENST00000579221 FKTNO75072 461 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms