RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.6□□□□□ -0.71
BRIP1-204ENST00000579028 TSEN34Q9BSV6 310 aaKnown RBP10.6□□□□□ -0.71
BRIP1-204ENST00000579028 TANGO6Q9C0B7 1094 aa10.6□□□□□ -0.71
BRIP1-204ENST00000579028 PLXNA1Q9UIW2 1896 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 DCDC2CA8MYV0 355 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 ADAMTS4O75173 837 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 IDH1O75874 414 aaKnown RBP10.59□□□□□ -0.71
BRIP1-204ENST00000579028 SLC25A27O95847 323 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 TIMP1P01033 207 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 MRPS5P82675 430 aaKnown RBP10.59□□□□□ -0.71
BRIP1-204ENST00000579028 PLS1Q14651 629 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 KIAA1755Q5JYT7 1200 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 MAGEB6Q8N7X4 407 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 ATG4CQ96DT6 458 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 FAM122AQ96E09 287 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 TINF2Q9BSI4 451 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 TBX21Q9UL17 535 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
BRIP1-204ENST00000579028 NAV1Q8NEY1 1877 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 CDH23Q9H251 3354 aa10.59□□□□□ -0.71
BRIP1-204ENST00000579028 FLOT1O75955 427 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 ZNF865P0CJ78 1059 aaPredicted RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 AKR1A1P14550 325 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 PBX2P40425 430 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 ACLYP53396 1101 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 PPIGQ13427 754 aaKnown RBP eCLIP10.58□□□□□ -0.722e-6■■□□□ 14.2
BRIP1-204ENST00000579028 ADGRE1Q14246 886 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 ZNF792Q3KQV3 632 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 TMEM240Q5SV17 173 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 MFSD5Q6N075 450 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 C16orf59Q7L2K0 433 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 RIOX2Q8IUF8 465 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 KLHDC9Q8NEP7 349 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 NUP133Q8WUM0 1156 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 PPM1EQ8WY54 764 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 UHRF1Q96T88 793 aaPredicted RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 RIOK1Q9BRS2 568 aaKnown RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 PRDM12Q9H4Q4 367 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 STARD7Q9NQZ5 370 aa10.58□□□□□ -0.72
BRIP1-204ENST00000579028 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 COL11A1P12107 1806 aaPredicted RBP10.58□□□□□ -0.72
BRIP1-204ENST00000579028 MOXD2PA6NHM9 499 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 GRXCR1A8MXD5 290 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 MPHOSPH10O00566 681 aaKnown RBP10.57□□□□□ -0.72
BRIP1-204ENST00000579028 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
BRIP1-204ENST00000579028 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
BRIP1-204ENST00000579028 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 TMEM132BQ14DG7 1078 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 CCSAPQ6IQ19 270 aaPredicted RBP10.57□□□□□ -0.72
BRIP1-204ENST00000579028 CCDC174Q6PII3 467 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 CCDC129Q6ZRS4 1044 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 LENG1Q96BZ8 264 aaPredicted RBP10.57□□□□□ -0.72
BRIP1-204ENST00000579028 MMP19Q99542 508 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
BRIP1-204ENST00000579028 ADAMTS5Q9UNA0 930 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 MROH7Q68CQ1 1323 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 SYNRGQ9UMZ2 1314 aa10.57□□□□□ -0.72
BRIP1-204ENST00000579028 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
BRIP1-204ENST00000579028 PGK2P07205 417 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 TRIM27P14373 513 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 CDK7P50613 346 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 OS9Q13438 667 aaPredicted RBP10.56□□□□□ -0.72
BRIP1-204ENST00000579028 KCTD2Q14681 263 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 RAB30Q15771 203 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 SIAH1Q8IUQ4 282 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 ANTXR1Q9H6X2 564 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 CNPY2Q9Y2B0 182 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 ELP1O95163 1332 aa10.56□□□□□ -0.72
BRIP1-204ENST00000579028 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 CSF2RAP15509 400 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 CST5P28325 142 aaPredicted RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 COPB2P35606 906 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 KCNA10Q16322 511 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 PSRC1Q6PGN9 363 aaPredicted RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 ZNF365Q70YC5 407 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 CLEC10AQ8IUN9 316 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 SPICE1Q8N0Z3 855 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 TMEM199Q8N511 208 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 MSL3Q8N5Y2 521 aaKnown RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 C1QTNF1Q9BXJ1 281 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 CRNKL1Q9BZJ0 848 aaKnown RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 CCDC8Q9H0W5 538 aaPredicted RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 MCM9Q9NXL9 1143 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 MSRAQ9UJ68 235 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 FAM184BQ9ULE4 1060 aa10.55□□□□□ -0.72
BRIP1-204ENST00000579028 NOP58Q9Y2X3 529 aaKnown RBP10.55□□□□□ -0.72
BRIP1-204ENST00000579028 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms