RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 RAG1P15918 1043 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PLCG2P16885 1265 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 MVPQ14764 893 aaKnown RBP8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 LRRC41Q15345 812 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CCDC174Q6PII3 467 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 FOXP4Q8IVH2 680 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 NPLOC4Q8TAT6 608 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 NSUN4Q96CB9 384 aaKnown RBP8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 NRBP1Q9UHY1 535 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 IGSF3O75054 1194 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ADORA1P30542 326 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ADCYAP1R1P41586 468 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP14P54578 494 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 JAG1P78504 1218 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 HNRNPUQ00839 825 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ST3GAL2Q16842 350 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 WDR78Q5VTH9 848 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TOX2Q96NM4 488 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PRRX2Q99811 253 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 KIAA1683Q9H0B3 1180 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SIL1Q9H173 461 aa8.84□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CDK5RAP2Q96SN8 1893 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 MYOGP15173 224 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 VCAM1P19320 739 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 ADORA2AP29274 412 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 CATSPERGQ6ZRH7 1159 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 ANKRD33Q7Z3H0 272 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 DPP9Q86TI2 863 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 ABRAQ8N0Z2 381 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 CRACR2BQ8N4Y2 399 aaPredicted RBP8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 RMDN1Q96DB5 314 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 NOL10Q9BSC4 688 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 COPRSQ9NQ92 184 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 SLC5A4Q9NY91 659 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 BTBD7Q9P203 1132 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 AKAP2Q9Y2D5 859 aa8.83□□□□□ -1
CDK5RAP3-209ENST00000578663 ASPMQ8IZT6 3477 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 FLT1P17948 1338 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 ZNF521Q96K83 1311 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 FRYLO94915 3013 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 A0A1B0GUL7 405 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 GDF11O95390 407 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 BAG3O95817 575 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 HLA-DOAP06340 250 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 PPP4CP60510 307 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 PPIGQ13427 754 aaKnown RBP eCLIP8.82□□□□□ -13e-8■■■□□ 19.1
CDK5RAP3-209ENST00000578663 PPP2R2DQ66LE6 453 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 DGLUCYQ7Z3D6 616 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 BMP8AQ7Z5Y6 402 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 RNF180Q86T96 592 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 SH3RF3Q8TEJ3 882 aaPredicted RBP8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 ATOH1Q92858 354 aaPredicted RBP8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 FEZ1Q99689 392 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 XPNPEP3Q9NQH7 507 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 TMEM39AQ9NV64 488 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 HMG20BQ9P0W2 317 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 TBX21Q9UL17 535 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
CDK5RAP3-209ENST00000578663 A0A1W2PQ45 241 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 A0A1W2PQY0 241 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 DCDC2CA8MYV0 355 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 PQBP1O60828 265 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 TIMP1P01033 207 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 GH2P01242 217 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 RARBP10826 455 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 ARID4AP29374 1257 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 RABGGTBP53611 331 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 SHROOM1Q2M3G4 852 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 ANO1Q5XXA6 986 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 PSRC1Q6PGN9 363 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 ZNF365Q70YC5 407 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 MB21D1Q8N884 522 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 SPATA5Q8NB90 893 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 SLC44A5Q8NCS7 719 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 FERMT2Q96AC1 680 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 XAGE2Q96GT9 111 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 MOV10L1Q9BXT6 1211 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 RAI14Q9P0K7 980 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 DACH1Q9UI36 760 aa8.81□□□□□ -1
CDK5RAP3-209ENST00000578663 MROH7Q68CQ1 1323 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 PTPRSQ13332 1948 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 ACRP10323 421 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 TIMM10P62072 90 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 FAAP100Q0VG06 881 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 LEXMQ3ZCV2 418 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms