RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 CALM2P0DP24 149 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 CALM3P0DP25 149 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 PDHBP11177 359 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 VCAM1P19320 739 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 TM4SF4P48230 202 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 INHBEP58166 350 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
IFT20-207ENST00000578547 FAM83BQ5T0W9 1011 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 GPAT2Q6NUI2 795 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
IFT20-207ENST00000578547 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
IFT20-207ENST00000578547 DCAF4Q8WV16 495 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 LPAR1Q92633 364 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 TANGO6Q9C0B7 1094 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
IFT20-207ENST00000578547 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 TPCN1Q9ULQ1 816 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 BTBD19C9JJ37 291 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 IGF2BP3O00425 579 aaKnown RBP eCLIP14.16□□□□□ -0.14
IFT20-207ENST00000578547 LARGE1O95461 756 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 PARP1P09874 1014 aaKnown RBP14.16□□□□□ -0.14
IFT20-207ENST00000578547 BMP3P12645 472 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
IFT20-207ENST00000578547 METAP2P50579 478 aaKnown RBP eCLIP14.16□□□□□ -0.14
IFT20-207ENST00000578547 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
IFT20-207ENST00000578547 TROAPQ12815 778 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 GRM4Q14833 912 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 RTN1Q16799 776 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 TREML2Q5T2D2 321 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 KCTD1Q719H9 257 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 FASTKD5Q7L8L6 764 aaKnown RBP14.16□□□□□ -0.14
IFT20-207ENST00000578547 PROCA1Q8NCQ7 364 aaPredicted RBP14.16□□□□□ -0.14
IFT20-207ENST00000578547 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 C12orf42Q96LP6 360 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 LIMCH1Q9UPQ0 1083 aa14.16□□□□□ -0.14
IFT20-207ENST00000578547 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
IFT20-207ENST00000578547 KIF5BP33176 963 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 ZNF543Q08ER8 600 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 SREBF2Q12772 1141 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 ASPRV1Q53RT3 343 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 FAM43AQ8N2R8 423 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 NECAB1Q8N987 351 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 ZNF274Q96GC6 653 aaPredicted RBP14.15□□□□□ -0.14
IFT20-207ENST00000578547 SLKQ9H2G2 1235 aaPredicted RBP14.15□□□□□ -0.14
IFT20-207ENST00000578547 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
IFT20-207ENST00000578547 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 AGTPBP1Q9UPW5 1226 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
IFT20-207ENST00000578547 TMEM232C9JQI7 657 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 EVCP57679 992 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 ME3Q16798 604 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 GPATCH4Q5T3I0 446 aaKnown RBP14.14□□□□□ -0.15
IFT20-207ENST00000578547 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 ANKRD23Q86SG2 305 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
IFT20-207ENST00000578547 STAG2Q8N3U4 1231 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 FANCBQ8NB91 859 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 IL27Q8NEV9 243 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 CPVLQ9H3G5 476 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 MAD2L2Q9UI95 211 aa14.14□□□□□ -0.15
IFT20-207ENST00000578547 USP17L15C9J2P7 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L13C9JLJ4 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L11C9JVI0 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 KLRF2D3W0D1 207 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L18D6R9N7 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L22D6RA61 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L17D6RBQ6 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L19D6RCP7 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L20D6RJB6 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 PDHXO00330 501 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
IFT20-207ENST00000578547 FLOT1O75955 427 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 PLEKHA8P1O95397 391 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 SLC16A2P36021 539 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 MCM2P49736 904 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 RCAN1P53805 252 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 IRX3P78415 501 aaPredicted RBP14.13□□□□□ -0.15
IFT20-207ENST00000578547 USP17L24Q0WX57 530 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 CMTR1Q8N1G2 835 aaKnown RBP14.13□□□□□ -0.15
IFT20-207ENST00000578547 KIFC2Q96AC6 838 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
IFT20-207ENST00000578547 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 UBA5Q9GZZ9 404 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
IFT20-207ENST00000578547 RBM28Q9NW13 759 aaKnown RBP14.13□□□□□ -0.15
IFT20-207ENST00000578547 NID2Q14112 1375 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 PALM3A6NDB9 673 aaPredicted RBP14.12□□□□□ -0.15
IFT20-207ENST00000578547 PFKFB2O60825 505 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 CDC27P30260 824 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 HOXA7P31268 230 aaPredicted RBP14.12□□□□□ -0.15
IFT20-207ENST00000578547 ADD1P35611 737 aaKnown RBP14.12□□□□□ -0.15
IFT20-207ENST00000578547 STAT2P52630 851 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 SCRN1Q12765 414 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.15
IFT20-207ENST00000578547 OTUD7BQ6GQQ9 843 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 CATSPERGQ6ZRH7 1159 aa14.12□□□□□ -0.15
IFT20-207ENST00000578547 TMTC3Q6ZXV5 915 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms