RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ORC2Q13416 577 aaPredicted RBP12.72□□□□□ -0.37
SKA2-204ENST00000578519 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
SKA2-204ENST00000578519 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 CNNM3Q8NE01 707 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 CEP95Q96GE4 821 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 KANSL2Q9H9L4 492 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 BARHL2Q9NY43 387 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 KCNH3Q9ULD8 1083 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 MYH15Q9Y2K3 1946 aa12.72□□□□□ -0.37
SKA2-204ENST00000578519 LAD1O00515 517 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 MPHOSPH10O00566 681 aaKnown RBP12.71□□□□□ -0.37
SKA2-204ENST00000578519 MYO1BO43795 1136 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 TXLNAP40222 546 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 NR5A1Q13285 461 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 DHX8Q14562 1220 aaKnown RBP12.71□□□□□ -0.37
SKA2-204ENST00000578519 DLGAP5Q15398 846 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 CFAP100Q494V2 611 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 CERKLQ49MI3 558 aaPredicted RBP12.71□□□□□ -0.37
SKA2-204ENST00000578519 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.37
SKA2-204ENST00000578519 MCTP2Q6DN12 878 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
SKA2-204ENST00000578519 IGKV6D-41A0A0C4DH26 115 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 ESPNB1AK53 854 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 SMC2O95347 1197 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 DPEP1P16444 411 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 NAPAP54920 295 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 NLRP12P59046 1061 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 TNIP1Q15025 636 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 DALRD3Q5D0E6 543 aaKnown RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 TMEM179Q6ZVK1 233 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 DEFB132Q7Z7B7 95 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 ZSCAN30Q86W11 494 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 NAP1L4Q99733 375 aaKnown RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 BPIFA3Q9BQP9 254 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 MXD3Q9BW11 206 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 CBX8Q9HC52 389 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
SKA2-204ENST00000578519 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 COL2A1P02458 1487 aaPredicted RBP12.7□□□□□ -0.38
SKA2-204ENST00000578519 ESYT2A0FGR8 921 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 ADCY5O95622 1261 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 AKR1B1P15121 316 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
SKA2-204ENST00000578519 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
SKA2-204ENST00000578519 FKBP1CQ5VVH2 108 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 SHC4Q6S5L8 630 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 KRBA2Q6ZNG9 492 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
SKA2-204ENST00000578519 STAG2Q8N3U4 1231 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 DCAF4Q8WV16 495 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 MKL1Q969V6 931 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 PCDHB6Q9Y5E3 794 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
SKA2-204ENST00000578519 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 SNHG28P0DPA3 235 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 PDHBP11177 359 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 SHMT1P34896 483 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 LONP1P36776 959 aaKnown RBP12.68□□□□□ -0.38
SKA2-204ENST00000578519 TNNI2P48788 182 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 ATP2C1P98194 919 aaPredicted RBP12.68□□□□□ -0.38
SKA2-204ENST00000578519 PIK3AP1Q6ZUJ8 805 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 TRIML1Q8N9V2 468 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 TNFRSF25Q93038 417 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 MYH1P12882 1939 aa12.68□□□□□ -0.38
SKA2-204ENST00000578519 PNMA6FA0A0J9YX94 578 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 SMCO2A6NFE2 343 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 UBE2Q2LH0YL09 131 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 STXBP3O00186 592 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
SKA2-204ENST00000578519 ATP2B2Q01814 1243 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 ZNF543Q08ER8 600 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 TCP10Q12799 353 aa12.67□□□□□ -0.38
SKA2-204ENST00000578519 NONOQ15233 471 aaKnown RBP eCLIP12.67□□□□□ -0.38
SKA2-204ENST00000578519 ZNF174Q15697 407 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms