RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 AXDND1Q5T1B0 1012 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 KIAA1211LQ6NV74 962 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 TMPRSS7Q7RTY8 843 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 TSPYL5Q86VY4 417 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 FAM178BQ8IXR5 827 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 DAGLBQ8NCG7 672 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 BCL7CQ8WUZ0 217 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 KLHL6Q8WZ60 621 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 HAUS7Q99871 368 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 PRDM14Q9GZV8 571 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 GBP3Q9H0R5 595 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 SEMA3GQ9NS98 782 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 ZSWIM5Q9P217 1185 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 ANGEL1Q9UNK9 670 aaKnown RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 A0A087WZG4 1122 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ANKRD34BA5PLL1 514 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 RBAK-RBAKDNI3L0D1 243 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 SHOXO15266 292 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 CBFA2T2O43439 604 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 HYAL3O43820 417 aaPredicted RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 DDAH1O94760 285 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 GJB6O95452 261 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 PRAMEF1O95521 474 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 WNT11O96014 354 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ITGA4P13612 1032 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 CD247P20963 164 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 TPP2P29144 1249 aaPredicted RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 BNIP3Q12983 259 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 IKZF1Q13422 519 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 SNW1Q13573 536 aaKnown RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 GAB4Q2WGN9 574 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 NOL9Q5SY16 702 aaKnown RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ARTNQ5T4W7 220 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ANGEL2Q5VTE6 544 aaKnown RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 DCAF15Q66K64 600 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 HEATR6Q6AI08 1181 aaKnown RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 C6orf15Q6UXA7 325 aaPredicted RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 EEPD1Q7L9B9 569 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 TMC3Q7Z5M5 1100 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ZNF655Q8N720 491 aaPredicted RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 CELF2-AS1Q8N7Q2 184 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 FLCNQ8NFG4 579 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 SYTL5Q8TDW5 730 aaPredicted RBP3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 MICAL1Q8TDZ2 1067 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 HDAC8Q9BY41 377 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 GP6Q9HCN6 339 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ATP13A1Q9HD20 1204 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 CHST7Q9NS84 486 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 FAM86C1Q9NVL1 165 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 GFOD1Q9NXC2 390 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 LMCD1Q9NZU5 365 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 SIRPGQ9P1W8 387 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 WHRNQ9P202 907 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 ZNF451Q9Y4E5 1061 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 FHOD1Q9Y613 1164 aa3.44□□□□□ -1.86
PTP4A1-204ENST00000578299 SHISA3A0PJX4 238 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 B2RBV5 119 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 PPM1BO75688 479 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 EPHX1P07099 455 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 ZNF445P59923 1031 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 SERINC3Q13530 473 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 TCTN2Q96GX1 697 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 DNAJC2Q99543 621 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 APBA2Q99767 749 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 DSCC1Q9BVC3 393 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 KLHL25Q9H0H3 589 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 EPN3Q9H201 632 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 ZFP64Q9NPA5 681 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 PAK6Q9NQU5 681 aaPredicted RBP3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 ST7Q9NRC1 585 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 SUSD2Q9UGT4 822 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 DUSP13Q9UII6 198 aa3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 DIS3Q9Y2L1 958 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 SF3B6Q9Y3B4 125 aaKnown RBP3.43□□□□□ -1.86
PTP4A1-204ENST00000578299 WASH4PA8MWX3 477 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 SUSD5O60279 629 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 ESR1P03372 595 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 GSNP06396 782 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 CD8BP10966 210 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 FUT4P22083 530 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 LTKP29376 864 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 BMP8BP34820 402 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 CD96P40200 585 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 ZP2Q05996 745 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 CWF19L1Q69YN2 538 aaKnown RBP3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 MRM1Q6IN84 353 aaKnown RBP3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 ZNF574Q6ZN55 896 aaPredicted RBP3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 RNF111Q6ZNA4 994 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 NFXL1Q6ZNB6 911 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 LRP10Q7Z4F1 713 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 SPRED2Q7Z698 418 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 ADAT2Q7Z6V5 191 aaKnown RBP3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 WFDC3Q8IUB2 231 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 CREG2Q8IUH2 290 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 TP53INP2Q8IXH6 220 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 FIBCD1Q8N539 461 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 AGBL5Q8NDL9 886 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 PMFBP1Q8TBY8 1022 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 MKL1Q969V6 931 aa3.42□□□□□ -1.86
PTP4A1-204ENST00000578299 RCC1LQ96I51 464 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms