RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 JAG1P78504 1218 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 PPATQ06203 517 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 Q6ZUG5 572 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 SLC10A4Q96EP9 437 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 EVI5O60447 810 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 NMT2O60551 498 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 RCAN1P53805 252 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 HUNKP57058 714 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 ATP2B2Q01814 1243 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 PPIL2Q13356 520 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 SHROOM1Q2M3G4 852 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 SYNE3Q6ZMZ3 975 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 CATIPQ7Z7H3 387 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 ZNF280CQ8ND82 737 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 BRF1Q92994 677 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 HHIPL1Q96JK4 782 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 TCEANC2Q96MN5 208 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 FEZ1Q99689 392 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 TMX2Q9Y320 296 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 TLL2Q9Y6L7 1015 aa13.1□□□□□ -0.31
TRAPPC8-204ENST00000578252 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 ARHGAP33O14559 1287 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 CXCL11O14625 94 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 CALM1P0DP23 149 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 CALM2P0DP24 149 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 CALM3P0DP25 149 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 USP14P54578 494 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 AK2P54819 239 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 EVCP57679 992 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 PNMA1Q8ND90 353 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 GMCL1P1Q8NEA9 526 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 CLMNQ96JQ2 1002 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 KIAA1683Q9H0B3 1180 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 ZHX2Q9Y6X8 837 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 PTPRFP10586 1907 aa13.09□□□□□ -0.31
TRAPPC8-204ENST00000578252 LOC285556D6RIA3 1793 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 DDAH1O94760 285 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZBTB48P10074 688 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 APLP1P51693 650 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 LPAR1Q92633 364 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 CHMP4CQ96CF2 233 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 ABT1Q9ULW3 272 aaKnown RBP13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
TRAPPC8-204ENST00000578252 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZBTB43O43298 467 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 BACE1P56817 501 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 SPP2Q13103 211 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 SH3D19Q5HYK7 790 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 RGMBQ6NW40 437 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZNF654Q8IZM8 581 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 SNX21Q969T3 373 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 WNK4Q96J92 1243 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 LIMCH1Q9UPQ0 1083 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 KCNH4Q9UQ05 1017 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 NID2Q14112 1375 aa13.07□□□□□ -0.32
TRAPPC8-204ENST00000578252 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 F5H6K3 240 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 KIF5BP33176 963 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 ECE1P42892 770 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 ZNF157P51786 506 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 KLRC3Q07444 240 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 SNAPC2Q13487 334 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 MTMR2Q13614 643 aa13.06□□□□□ -0.32
TRAPPC8-204ENST00000578252 CCDC84Q86UT8 332 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms