RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 HEATR3Q7Z4Q2 680 aa31.7■■■□□ 2.66
LIMD2-203ENST00000578067 CCDC17Q96LX7 622 aa31.7■■■□□ 2.66
LIMD2-203ENST00000578067 STXBP3O00186 592 aa31.69■■■□□ 2.66
LIMD2-203ENST00000578067 PDHBP11177 359 aa31.69■■■□□ 2.66
LIMD2-203ENST00000578067 SPECC1Q5M775 1068 aa31.69■■■□□ 2.66
LIMD2-203ENST00000578067 TYW1BQ6NUM6 668 aa31.69■■■□□ 2.66
LIMD2-203ENST00000578067 PI4KBQ9UBF8 816 aa31.69■■■□□ 2.66
LIMD2-203ENST00000578067 CLIP2Q9UDT6 1046 aa31.69■■■□□ 2.66
LIMD2-203ENST00000578067 ADAMTS3O15072 1205 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 IQCB1Q15051 598 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 ZRSR1Q15695 479 aaKnown RBP31.68■■■□□ 2.66
LIMD2-203ENST00000578067 DAGLBQ8NCG7 672 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 RRP36Q96EU6 259 aaKnown RBP31.68■■■□□ 2.66
LIMD2-203ENST00000578067 CPVLQ9H3G5 476 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 WNT7AO00755 349 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 ZNF174Q15697 407 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 CFAP100Q494V2 611 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 ZSCAN30Q86W11 494 aa31.68■■■□□ 2.66
LIMD2-203ENST00000578067 LRRC47Q8N1G4 583 aaKnown RBP31.68■■■□□ 2.66
LIMD2-203ENST00000578067 DDTLA6NHG4 134 aaPredicted RBP31.67■■■□□ 2.66
LIMD2-203ENST00000578067 CSRNP2Q9H175 543 aa31.67■■■□□ 2.66
LIMD2-203ENST00000578067 PTMAP06454 111 aaKnown RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 EIF6P56537 245 aaKnown RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 LONRF3Q496Y0 759 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 ASPRV1Q53RT3 343 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 PPP4R3BQ5MIZ7 849 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 KRBA2Q6ZNG9 492 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 CEP57L1Q8IYX8 460 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 LARGE2Q8N3Y3 721 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 FERMT2Q96AC1 680 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 DNAJC18Q9H819 358 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 A0A087WWV3 80 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 MPHOSPH10O00566 681 aaKnown RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 SNHG28P0DPA3 235 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 CLEC10AQ8IUN9 316 aa31.66■■■□□ 2.66
LIMD2-203ENST00000578067 ZSCAN29Q8IWY8 852 aaPredicted RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 ELOA2Q8IYF1 753 aaPredicted RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 NAT10Q9H0A0 1025 aaKnown RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 TDRD3Q9H7E2 651 aaKnown RBP31.66■■■□□ 2.66
LIMD2-203ENST00000578067 M0R2N6 131 aa31.65■■■□□ 2.66
LIMD2-203ENST00000578067 RSBN1LQ6PCB5 846 aaPredicted RBP31.65■■■□□ 2.66
LIMD2-203ENST00000578067 SH3BP5LQ7L8J4 393 aa31.65■■■□□ 2.66
LIMD2-203ENST00000578067 CNNM3Q8NE01 707 aa31.65■■■□□ 2.66
LIMD2-203ENST00000578067 VPS33BQ9H267 617 aa31.65■■■□□ 2.66
LIMD2-203ENST00000578067 RIOX1Q9H6W3 641 aa31.65■■■□□ 2.66
LIMD2-203ENST00000578067 SEC63Q9UGP8 760 aaKnown RBP31.65■■■□□ 2.66
LIMD2-203ENST00000578067 CCDC12Q8WUD4 166 aaPredicted RBP31.65■■■□□ 2.66
LIMD2-203ENST00000578067 ZNF277Q9NRM2 450 aaPredicted RBP31.65■■■□□ 2.66
LIMD2-203ENST00000578067 ATP2C1P98194 919 aaPredicted RBP31.64■■■□□ 2.66
LIMD2-203ENST00000578067 FOXP4Q8IVH2 680 aaPredicted RBP31.64■■■□□ 2.66
LIMD2-203ENST00000578067 TUBE1Q9UJT0 475 aa31.64■■■□□ 2.66
LIMD2-203ENST00000578067 KIF13BQ9NQT8 1826 aa31.64■■■□□ 2.65
LIMD2-203ENST00000578067 GOLGA6L19H0YKK7 550 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 ENTPD3O75355 529 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 PRMT6Q96LA8 375 aaPredicted RBP31.63■■■□□ 2.65
LIMD2-203ENST00000578067 FRMPD2Q68DX3 1309 aaPredicted RBP31.63■■■□□ 2.65
LIMD2-203ENST00000578067 PSME4Q14997 1843 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 GREB1LQ9C091 1923 aaPredicted RBP31.63■■■□□ 2.65
LIMD2-203ENST00000578067 SIPA1L1O43166 1804 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 SLURP2P0DP57 97 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 NLRP12P59046 1061 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 PTGDRQ13258 359 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 SOGA3Q5TF21 947 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 HOMER1Q86YM7 354 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 TRIM34Q9BYJ4 488 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 UBA5Q9GZZ9 404 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 ZMYND12Q9H0C1 365 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 VAT1LQ9HCJ6 419 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 PCDHA6Q9UN73 950 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 PCDHA8Q9Y5H6 950 aa31.63■■■□□ 2.65
LIMD2-203ENST00000578067 VIL1P09327 827 aaKnown RBP31.62■■■□□ 2.65
LIMD2-203ENST00000578067 PIGSQ96S52 555 aa31.62■■■□□ 2.65
LIMD2-203ENST00000578067 CCDC194A0A1B0GVG4 234 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 RAD17O75943 681 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 NAPAP54920 295 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 CERKLQ49MI3 558 aaPredicted RBP31.61■■■□□ 2.65
LIMD2-203ENST00000578067 METTL16Q86W50 562 aaKnown RBP31.61■■■□□ 2.65
LIMD2-203ENST00000578067 CCDC125Q86Z20 511 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 HOOK1Q9UJC3 728 aaKnown RBP31.61■■■□□ 2.65
LIMD2-203ENST00000578067 PSMD14O00487 310 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 POLR2DO15514 142 aaKnown RBP31.61■■■□□ 2.65
LIMD2-203ENST00000578067 TGFB2P61812 414 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 RASGRP4Q8TDF6 673 aa31.61■■■□□ 2.65
LIMD2-203ENST00000578067 BECN2A8MW95 431 aa31.6■■■□□ 2.65
LIMD2-203ENST00000578067 DPCR1Q3MIW9 517 aa31.6■■■□□ 2.65
LIMD2-203ENST00000578067 TATDN1Q6P1N9 297 aa31.6■■■□□ 2.65
LIMD2-203ENST00000578067 PIM2Q9P1W9 311 aa31.6■■■□□ 2.65
LIMD2-203ENST00000578067 ATRNL1Q5VV63 1379 aa31.6■■■□□ 2.65
LIMD2-203ENST00000578067 FAM196BA6NMK8 535 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 BIN1O00499 593 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 ZBTB7AO95365 584 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 ZNF543Q08ER8 600 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 PNOCQ13519 176 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 DHX40Q8IX18 779 aaKnown RBP31.59■■■□□ 2.65
LIMD2-203ENST00000578067 GMLQ99445 158 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 BPIFA3Q9BQP9 254 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 hCG_1984214I3L0E3 225 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 MCM7P33993 719 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 ATP2B2Q01814 1243 aa31.59■■■□□ 2.65
LIMD2-203ENST00000578067 USP49Q70CQ1 688 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms