RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 ZNF512BQ96KM6 892 aaPredicted RBP6.37□□□□□ -1.39
KRT39-202ENST00000578029 MRGPRX3Q96LB0 322 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 C8orf48Q96LL4 319 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 PSMD1Q99460 953 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 LRRC4BQ9NT99 713 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 PCOLCE2Q9UKZ9 415 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 CEP131Q9UPN4 1083 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 EMC9Q9Y3B6 208 aa6.37□□□□□ -1.39
KRT39-202ENST00000578029 A0A087WZG4 1122 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 TERTO14746 1132 aaKnown RBP6.36□□□□□ -1.39
KRT39-202ENST00000578029 ADAMTS2O95450 1211 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 EYA4O95677 639 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 ASLP04424 464 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 POU3F2P20265 443 aaPredicted RBP6.36□□□□□ -1.39
KRT39-202ENST00000578029 FLT3P36888 993 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 ASPAP45381 313 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 AUHQ13825 339 aaKnown RBP6.36□□□□□ -1.39
KRT39-202ENST00000578029 COL9A3Q14050 684 aaPredicted RBP6.36□□□□□ -1.39
KRT39-202ENST00000578029 NECAB2Q7Z6G3 386 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 FBXO11Q86XK2 927 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 CERS3Q8IU89 383 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.36□□□□□ -1.39
KRT39-202ENST00000578029 SLC7A14Q8TBB6 771 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 CCDC140Q96MF4 163 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 GSX1Q9H4S2 264 aaPredicted RBP6.36□□□□□ -1.39
KRT39-202ENST00000578029 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 GP6Q9HCN6 339 aa6.36□□□□□ -1.39
KRT39-202ENST00000578029 PLEKHD1A6NEE1 506 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 DLL1O00548 723 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 TBX1O43435 398 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 PRC1O43663 620 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 OPA1O60313 960 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 RASGRP1O95267 797 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 APPP05067 770 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 C6orf222P0C671 652 aaPredicted RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 NEK4P51957 841 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 RAC1P63000 192 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 TTF1Q15361 905 aaPredicted RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 NOL9Q5SY16 702 aaKnown RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 ACAD11Q709F0 780 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 BRAPQ7Z569 592 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 UBE3DQ7Z6J8 389 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 STRA8Q7Z7C7 330 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 SMYD4Q8IYR2 804 aaPredicted RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 ARHGEF39Q8N4T4 335 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 C12orf50Q8NA57 414 aaPredicted RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 ADCY4Q8NFM4 1077 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 WDR66Q8TBY9 1149 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 BTN2A2Q8WVV5 523 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 KCTD13Q8WZ19 329 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 PTPRN2Q92932 1015 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 RELTQ969Z4 430 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 KREMEN1Q96MU8 473 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 FBXL21Q9UKT6 434 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 DIS3Q9Y2L1 958 aaKnown RBP6.35□□□□□ -1.39
KRT39-202ENST00000578029 PCDHB12Q9Y5F1 795 aa6.35□□□□□ -1.39
KRT39-202ENST00000578029 BRINP1O60477 761 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 DLX3O60479 287 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 BCRP11274 1271 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 TBX4P57082 545 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 MAP4K2Q12851 820 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 STRN3Q13033 797 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 DHCR24Q15392 516 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 RNF219Q5W0B1 726 aaPredicted RBP6.34□□□□□ -1.39
KRT39-202ENST00000578029 ARMCX6Q7L4S7 300 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 MAMDC2Q7Z304 686 aaPredicted RBP6.34□□□□□ -1.39
KRT39-202ENST00000578029 CCDC146Q8IYE0 955 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 FMR1NBQ8N0W7 255 aaPredicted RBP6.34□□□□□ -1.39
KRT39-202ENST00000578029 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 SLC5A4Q9NY91 659 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 GABBR1Q9UBS5 961 aa6.34□□□□□ -1.39
KRT39-202ENST00000578029 CGGBP1Q9UFW8 167 aaPredicted RBP6.34□□□□□ -1.39
KRT39-202ENST00000578029 TNPO3Q9Y5L0 923 aaKnown RBP6.34□□□□□ -1.39
KRT39-202ENST00000578029 PHLDB1Q86UU1 1377 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 A0A0A0MRY4 1105 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 FAM83GA6ND36 823 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 B4E1Z4 1266 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 SHISA8B8ZZ34 492 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 SHOXO15266 292 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 TPD52L2O43399 206 aaKnown RBP6.33□□□□□ -1.4
KRT39-202ENST00000578029 KCNH1O95259 989 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 WISP1O95388 367 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 DRD2P14416 443 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 HOXC12P31275 282 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 IGFALSP35858 605 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 ETV3P41162 512 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 NFE2Q16621 373 aaPredicted RBP6.33□□□□□ -1.4
KRT39-202ENST00000578029 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 FDX2Q6P4F2 183 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 PKN3Q6P5Z2 889 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 TREML4Q6UXN2 200 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 UBE2R2Q712K3 238 aaPredicted RBP6.33□□□□□ -1.4
KRT39-202ENST00000578029 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 DNAJB8Q8NHS0 232 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms