RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 PFASO15067 1338 aa17.86■□□□□ 0.45
RN7SL560P-201ENST00000577943 M0R2C6 588 aa17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 MSCO60682 206 aa17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 FSD1Q9BTV5 496 aa17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 EPB41L4AQ9HCS5 686 aaPredicted RBP17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 DDX20Q9UHI6 824 aaKnown RBP17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 DNAH12Q6ZR08 3092 aa17.85■□□□□ 0.45
RN7SL560P-201ENST00000577943 PATL2C9JE40 543 aaKnown RBP17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 COBLO75128 1261 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 SLC25A27O95847 323 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 TMEM132BQ14DG7 1078 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 OLFML2BQ68BL8 750 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 ZNF444Q8N0Y2 327 aaPredicted RBP17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 ABRAQ8N0Z2 381 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 PI4K2BQ8TCG2 481 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 ZNF287Q9HBT7 754 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 FBXO28Q9NVF7 368 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 SZT2Q5T011 3432 aa17.84■□□□□ 0.45
RN7SL560P-201ENST00000577943 COL6A1P12109 1028 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 FCER1AP12319 257 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 CYBAP13498 195 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 SYN1P17600 705 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 MX1P20591 662 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 IFNL3Q8IZI9 196 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 TRPV1Q8NER1 839 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 SEC62Q99442 399 aaKnown RBP17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 NACAP1Q9BZK3 213 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 NYAP2Q9P242 653 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 PPP1R9AQ9ULJ8 1098 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 ADAMTS5Q9UNA0 930 aa17.83■□□□□ 0.44
RN7SL560P-201ENST00000577943 A0A1W2PPC1 479 aa17.82■□□□□ 0.44
RN7SL560P-201ENST00000577943 VWA5AO00534 786 aa17.82■□□□□ 0.44
RN7SL560P-201ENST00000577943 PRDM1O75626 825 aa17.82■□□□□ 0.44
RN7SL560P-201ENST00000577943 RIOX2Q8IUF8 465 aa17.82■□□□□ 0.44
RN7SL560P-201ENST00000577943 CRBNQ96SW2 442 aa17.82■□□□□ 0.44
RN7SL560P-201ENST00000577943 CLIP2Q9UDT6 1046 aa17.82■□□□□ 0.44
RN7SL560P-201ENST00000577943 IGHA2P01877 340 aa17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 STAT3P40763 770 aa17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 LRRC26Q2I0M4 334 aa17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 ANKRD45Q5TZF3 282 aa17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 MMP19Q99542 508 aa17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 SENP6Q9GZR1 1112 aaPredicted RBP17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 NAPBQ9H115 298 aa17.81■□□□□ 0.44
RN7SL560P-201ENST00000577943 F5H6K3 240 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 PDE4BQ07343 736 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 KLRC3Q07444 240 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 MAML3Q96JK9 1138 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 GDF15Q99988 308 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
RN7SL560P-201ENST00000577943 LAMA3Q16787 3333 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 MCM3APO60318 1980 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 IGKV6D-41A0A0C4DH26 115 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 SEPT4O43236 478 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 NDUFB10O96000 172 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 SLC3A2P08195 630 aaKnown RBP17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 TSPY3P0CV98 308 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 TSPY8P0CW00 308 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 BMP8BP34820 402 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 COPB2P35606 906 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 KCTD2Q14681 263 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 PRAMEF19Q5SWL8 479 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 ANO1Q5XXA6 986 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 CEP95Q96GE4 821 aa17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 ZNF214Q9UL59 606 aaPredicted RBP17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 CTDP1Q9Y5B0 961 aaPredicted RBP17.79■□□□□ 0.44
RN7SL560P-201ENST00000577943 DNM1LO00429 736 aa17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 TTLL1O95922 423 aa17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 PGK2P07205 417 aa17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 MAGEA10P43363 369 aaPredicted RBP17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 ARRDC4Q8NCT1 418 aa17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 REPS2Q8NFH8 660 aa17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 MTMR4Q9NYA4 1195 aa17.78■□□□□ 0.44
RN7SL560P-201ENST00000577943 SALL3Q9BXA9 1300 aa17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 KBTBD13C9JR72 458 aa17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 SLC4A3P48751 1232 aa17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 PPARAQ07869 468 aa17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 CCDC129Q6ZRS4 1044 aa17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 MKL1Q969V6 931 aa17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
RN7SL560P-201ENST00000577943 ZBED4O75132 1171 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 TFAP4Q01664 338 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 HDAC1Q13547 482 aaPredicted RBP17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 ZNF792Q3KQV3 632 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 FAM47AQ5JRC9 791 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 SNRNP48Q6IEG0 339 aaKnown RBP17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 CPXCR1Q8N123 301 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 LRRC47Q8N1G4 583 aaKnown RBP17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 NEDD1Q8NHV4 660 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 KIFC2Q96AC6 838 aa17.76■□□□□ 0.43
RN7SL560P-201ENST00000577943 EVI5LQ96CN4 794 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms