RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.03
MKS1-206ENST00000577824 ANKRD1Q15327 319 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 GPATCH4Q5T3I0 446 aaKnown RBP14.86□□□□□ -0.03
MKS1-206ENST00000577824 LBX2Q6XYB7 198 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 RASGRP2Q7LDG7 609 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 SPICE1Q8N0Z3 855 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 BRF1Q92994 677 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 RPAP3Q9H6T3 665 aaPredicted RBP14.86□□□□□ -0.03
MKS1-206ENST00000577824 PDRG1Q9NUG6 133 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.86□□□□□ -0.03
MKS1-206ENST00000577824 ADGRA2Q96PE1 1338 aa14.86□□□□□ -0.03
MKS1-206ENST00000577824 CCDC69A6NI79 296 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L15C9J2P7 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L13C9JLJ4 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L11C9JVI0 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L18D6R9N7 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L22D6RA61 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L17D6RBQ6 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L19D6RCP7 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L20D6RJB6 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 ALDH1A1P00352 501 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 CALM1P0DP23 149 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 CALM2P0DP24 149 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 CALM3P0DP25 149 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 BMP3P12645 472 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 SLC1A4P43007 532 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 AK2P54819 239 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 ZNF543Q08ER8 600 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 USP17L24Q0WX57 530 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 GRM1Q13255 1194 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 GRM4Q14833 912 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 ASPRV1Q53RT3 343 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 FAM83BQ5T0W9 1011 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 BTNL9Q6UXG8 535 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 CATIPQ7Z7H3 387 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 PNMA3Q9UL41 463 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
MKS1-206ENST00000577824 PDHXO00330 501 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 NEK4P51957 841 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 OTUD7BQ6GQQ9 843 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 JMYQ8N9B5 988 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 SAGE1Q9NXZ1 904 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 MAD2L2Q9UI95 211 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 FEM1BQ9UK73 627 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 SLC12A7Q9Y666 1083 aa14.84□□□□□ -0.03
MKS1-206ENST00000577824 KLF18A0A0U1RQI7 1052 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 PALM3A6NDB9 673 aaPredicted RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 SPDYE16A6NNV3 312 aaPredicted RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 STAT2P52630 851 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 APOBRQ0VD83 1088 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 PPP2R5BQ15173 497 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 NFXL1Q6ZNB6 911 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 FAM160B2Q86V87 743 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 GTF3C2Q8WUA4 911 aaPredicted RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 PARK7Q99497 189 aaKnown RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 NUP88Q99567 741 aaPredicted RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 ASCC2Q9H1I8 757 aaPredicted RBP14.83□□□□□ -0.04
MKS1-206ENST00000577824 PPP1R9AQ9ULJ8 1098 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 ADAMTS5Q9UNA0 930 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
MKS1-206ENST00000577824 ZBTB43O43298 467 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
MKS1-206ENST00000577824 OSBPP22059 807 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 FGD1P98174 961 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 MAP2K1Q02750 393 aaPredicted RBP14.82□□□□□ -0.04
MKS1-206ENST00000577824 KCTD1Q719H9 257 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 SLF1Q9BQI6 1058 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 MYL10Q9BUA6 226 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
MKS1-206ENST00000577824 GOLGA8BA8MQT2 603 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 CA12O43570 354 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 RAD21O60216 631 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 ST18O60284 1047 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 FLOT1O75955 427 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 FDX1P10109 184 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 SMARCA1P28370 1054 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 PDIA3P30101 505 aaKnown RBP14.81□□□□□ -0.04
MKS1-206ENST00000577824 DSG3P32926 999 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 KIF5BP33176 963 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 HERVK_113P62684 666 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 IRX3P78415 501 aaPredicted RBP14.81□□□□□ -0.04
MKS1-206ENST00000577824 COG2Q14746 738 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 CCDC96Q2M329 555 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 POTEEQ6S8J3 1075 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 MICU3Q86XE3 530 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 PRPF38AQ8NAV1 312 aaKnown RBP14.81□□□□□ -0.04
MKS1-206ENST00000577824 FANCBQ8NB91 859 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 CTCFLQ8NI51 663 aaPredicted RBP14.81□□□□□ -0.04
MKS1-206ENST00000577824 CHURC1Q8WUH1 139 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 SPZ1Q9BXG8 430 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
MKS1-206ENST00000577824 TPCN1Q9ULQ1 816 aa14.81□□□□□ -0.04
MKS1-206ENST00000577824 FRMPD2Q68DX3 1309 aaPredicted RBP14.81□□□□□ -0.04
MKS1-206ENST00000577824 TMEM232C9JQI7 657 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 TLR2O60603 784 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 CYP2C8P10632 490 aa14.8□□□□□ -0.04
MKS1-206ENST00000577824 GCLCP48506 637 aaPredicted RBP14.8□□□□□ -0.04
MKS1-206ENST00000577824 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms