RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SERPINB13Q9UIV8 391 aa17.28■□□□□ 0.36
PPP4R1-206ENST00000577779 GBF1Q92538 1859 aa17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 APBB1O00213 710 aa17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 TAL1P17542 331 aaPredicted RBP17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 DYNLL1P63167 89 aaKnown RBP17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 SKIV2LQ15477 1246 aaKnown RBP17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 MB21D1Q8N884 522 aa17.27■□□□□ 0.36
PPP4R1-206ENST00000577779 ROBO3Q96MS0 1386 aa17.27■□□□□ 0.35
PPP4R1-206ENST00000577779 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 AKR1A1P14550 325 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 TINF2Q9BSI4 451 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 EHD4Q9H223 541 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 WDFY4Q6ZS81 3184 aa17.26■□□□□ 0.35
PPP4R1-206ENST00000577779 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 USP5P45974 858 aa17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 ALYREFQ86V81 257 aaKnown RBP17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 PRRC2BQ5JSZ5 2229 aaKnown RBP17.25■□□□□ 0.35
PPP4R1-206ENST00000577779 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 ERC2O15083 957 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 PGK2P07205 417 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 ZNF865P0CJ78 1059 aaPredicted RBP17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 SEPT2Q15019 361 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 KCNA10Q16322 511 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 TTC6Q86TZ1 520 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 CDCA7LQ96GN5 454 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 MMP19Q99542 508 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
PPP4R1-206ENST00000577779 ZNF521Q96K83 1311 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 DSG3P32926 999 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 SHMT1P34896 483 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 PPP2R2DQ66LE6 453 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 VTI1AQ96AJ9 217 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 ATG4CQ96DT6 458 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 GLT1D1Q96MS3 346 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 MEIS3Q99687 375 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 IL23AQ9NPF7 189 aa17.23■□□□□ 0.35
PPP4R1-206ENST00000577779 ELP1O95163 1332 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 A0A1W2PRG0 241 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 GPR37L1O60883 481 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 FLOT1O75955 427 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 SLC25A27O95847 323 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 CYP2E1P05181 493 aaPredicted RBP17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 CYP7A1P22680 504 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 CDK7P50613 346 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 MIGA1Q8NAN2 632 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
PPP4R1-206ENST00000577779 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 FGBP02675 491 aa17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 KCTD2Q14681 263 aa17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 ZNF792Q3KQV3 632 aa17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 CCSAPQ6IQ19 270 aaPredicted RBP17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
PPP4R1-206ENST00000577779 TLR3O15455 904 aaKnown RBP17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 CYP2C18P33260 490 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 RABGGTBP53611 331 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 MTX1Q13505 466 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 TMEM132BQ14DG7 1078 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 CERS3Q8IU89 383 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 C11orf16Q9NQ32 467 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 PIH1D3Q9NQM4 214 aaKnown RBP17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 LRRC37A2A6NM11 1700 aa17.2■□□□□ 0.34
PPP4R1-206ENST00000577779 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 MYADML2A6NDP7 307 aa17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 ARVCFO00192 962 aa17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 GTPBP6O43824 516 aaPredicted RBP17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 IGSF3O75054 1194 aa17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 PLCD1P51178 756 aa17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 G3BP1Q13283 466 aaKnown RBP eCLIP17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 OTOP2Q7RTS6 562 aa17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 COG5Q9UP83 839 aa17.19■□□□□ 0.34
PPP4R1-206ENST00000577779 TLL1O43897 1013 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 DUSP11O75319 330 aaKnown RBP17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 ASGR1P07306 291 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 C6orf222P0C671 652 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 MYOGP15173 224 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 ZAP70P43403 619 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 FAM126BQ8IXS8 530 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 SPICE1Q8N0Z3 855 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■□□□□ 10
PPP4R1-206ENST00000577779 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 PCDHA11Q9Y5I1 949 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 MTCH2Q9Y6C9 303 aa17.18■□□□□ 0.34
PPP4R1-206ENST00000577779 SLC4A7Q9Y6M7 1214 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms