RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 TRMT2AQ8IZ69 625 aaKnown RBP8.43□□□□□ -1.06
TTC39C-204ENST00000577185 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-204ENST00000577185 HLA-CQ95604 372 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 XAGE2Q96GT9 111 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 MEIS3Q99687 375 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-204ENST00000577185 RFX7Q2KHR2 1363 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 ZSWIM8A7E2V4 1837 aa8.43□□□□□ -1.06
TTC39C-204ENST00000577185 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
TTC39C-204ENST00000577185 SRGAP3O43295 1099 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 GCLCP48506 637 aaPredicted RBP8.42□□□□□ -1.06
TTC39C-204ENST00000577185 SPP2Q13103 211 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 PABPC4Q13310 644 aaKnown RBP eCLIP8.42□□□□□ -1.06
TTC39C-204ENST00000577185 GORABQ5T7V8 394 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 ANKRD13CQ8N6S4 541 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 BAP1Q92560 729 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 ARHGAP45Q92619 1136 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 DEFB118Q96PH6 123 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 HMG20BQ9P0W2 317 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 CNTNAP5Q8WYK1 1306 aa8.42□□□□□ -1.06
TTC39C-204ENST00000577185 A0A1W2PPC1 479 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 CAP2P40123 477 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 MTX1Q13505 466 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 FAM110CQ1W6H9 321 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 TREML2Q5T2D2 321 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 CCDC84Q86UT8 332 aaPredicted RBP8.41□□□□□ -1.06
TTC39C-204ENST00000577185 CCDC155Q8N6L0 562 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 SPATA5Q8NB90 893 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 BBXQ8WY36 941 aaPredicted RBP8.41□□□□□ -1.06
TTC39C-204ENST00000577185 NSUN4Q96CB9 384 aaKnown RBP8.41□□□□□ -1.06
TTC39C-204ENST00000577185 PHOX2BQ99453 314 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 AS3MTQ9HBK9 375 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 PAK6Q9NQU5 681 aaPredicted RBP8.41□□□□□ -1.06
TTC39C-204ENST00000577185 RAI14Q9P0K7 980 aa8.41□□□□□ -1.06
TTC39C-204ENST00000577185 FAM196BA6NMK8 535 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 UQCRFS1P1P0C7P4 283 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 CD46P15529 392 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 RARSP54136 660 aaKnown RBP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 HMGCS2P54868 508 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 G3BP1Q13283 466 aaKnown RBP eCLIP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 NECAB2Q7Z6G3 386 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 TEX11Q8IYF3 940 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 MEIOBQ8N635 442 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 ZNF384Q8TF68 577 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 DHX36Q9H2U1 1008 aaKnown RBP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 ENAMQ9NRM1 1142 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.06
TTC39C-204ENST00000577185 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 HERC5Q9UII4 1024 aaKnown RBP8.4□□□□□ -1.06
TTC39C-204ENST00000577185 COL2A1P02458 1487 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-204ENST00000577185 RPTORQ8N122 1335 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 IPO8O15397 1037 aaKnown RBP8.39□□□□□ -1.07
TTC39C-204ENST00000577185 BAG3O95817 575 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 HMGCRP04035 888 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 CELA2BP08218 269 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-204ENST00000577185 CCNYL3P0C7X3 344 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 ARID4AP29374 1257 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-204ENST00000577185 TBC1D9Q6ZT07 1266 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 PAWRQ96IZ0 340 aaKnown RBP8.39□□□□□ -1.07
TTC39C-204ENST00000577185 ASCC2Q9H1I8 757 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-204ENST00000577185 TMOD4Q9NZQ9 345 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 PI4KBQ9UBF8 816 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 GJD2Q9UKL4 321 aa8.39□□□□□ -1.07
TTC39C-204ENST00000577185 C19orf81C9J6K1 198 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 GNAI2P04899 355 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 ASNSP08243 561 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 MCAMP43121 646 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 BACE1P56817 501 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 USP46P62068 366 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 IRX3P78415 501 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-204ENST00000577185 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 SV2AQ7L0J3 742 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 FOXP4Q8IVH2 680 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-204ENST00000577185 BEND7Q8N7W2 519 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-204ENST00000577185 SPRYD3Q8NCJ5 442 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 SH3RF3Q8TEJ3 882 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-204ENST00000577185 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
TTC39C-204ENST00000577185 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 MORF4L1Q9UBU8 362 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-204ENST00000577185 AK9Q5TCS8 1911 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 MYH13Q9UKX3 1938 aa8.38□□□□□ -1.07
TTC39C-204ENST00000577185 IGSF3O75054 1194 aa8.37□□□□□ -1.07
TTC39C-204ENST00000577185 FURINP09958 794 aa8.37□□□□□ -1.07
TTC39C-204ENST00000577185 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms