RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ZNF576Q9H609 170 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 TMEM265A0A087WTH1 108 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 GRXCR1A8MXD5 290 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 SMIM22K7EJ46 135 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 ZNF865P0CJ78 1059 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 AKR1B1P15121 316 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 ZNF792Q3KQV3 632 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 MMP19Q99542 508 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
NPLOC4-220ENST00000576940 SLC25A27O95847 323 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 PBX2P40425 430 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 IRX5P78411 483 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 TMEM179Q6ZVK1 233 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 C16orf59Q7L2K0 433 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 TIFAQ96CG3 184 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 CRNKL1Q9BZJ0 848 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 VCPKMTQ9H867 229 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 DCP1AQ9NPI6 582 aaPredicted RBP12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
NPLOC4-220ENST00000576940 ZNF236Q9UL36 1845 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 DCDC2CA8MYV0 355 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 PRKAB2O43741 272 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ADAMTS4O75173 837 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 TIMP1P01033 207 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 PDE6AP16499 860 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 STAT3P40763 770 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ACLYP53396 1101 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 KCTD2Q14681 263 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 SLFNL1Q499Z3 407 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ANKRD33Q7Z3H0 272 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 AACSQ86V21 672 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 LCORLQ8N3X6 602 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 STARD7Q9NQZ5 370 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 NRBP1Q9UHY1 535 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ADAMTS5Q9UNA0 930 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
NPLOC4-220ENST00000576940 CYP2D7A0A087X1C5 515 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 AKR1A1P14550 325 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 ICA1Q05084 483 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 CCDC85BQ15834 202 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 KCNA10Q16322 511 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 CCDC129Q6ZRS4 1044 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 KLHDC9Q8NEP7 349 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 TSEN34Q9BSV6 310 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 PBX4Q9BYU1 374 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 IL1RAPL2Q9NP60 686 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 EXOC6BQ9Y2D4 811 aa12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 DIS3Q9Y2L1 958 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-220ENST00000576940 MYO9BQ13459 2157 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 TCRBV5S4A2TA0A5A2 114 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 MYADML2A6NDP7 307 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 VWA5AO00534 786 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 RAD21O60216 631 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 SNAI1O95863 264 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 ACRP10323 421 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 CDK8P49336 464 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 TMEM240Q5SV17 173 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 CCSAPQ6IQ19 270 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 MFSD5Q6N075 450 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
NPLOC4-220ENST00000576940 SYNRGQ9UMZ2 1314 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 GOLIM4O00461 696 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 CSF2RAP15509 400 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 CDK7P50613 346 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 ADGRE1Q14246 886 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 TTF1Q15361 905 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 ZNF365Q70YC5 407 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 ATXN2LQ8WWM7 1075 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 ASB2Q96Q27 587 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 GAS2L1Q99501 681 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 SH2D4AQ9H788 454 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 TBX21Q9UL17 535 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 ZNF214Q9UL59 606 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 FAM184BQ9ULE4 1060 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
NPLOC4-220ENST00000576940 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 MOXD2PA6NHM9 499 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 CHGBP05060 677 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 IGFBP4P22692 258 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.45
NPLOC4-220ENST00000576940 RASIP1Q5U651 963 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms