RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 C12orf42Q96LP6 360 aa9.97□□□□□ -0.81
PRPF8-213ENST00000576407 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
PRPF8-213ENST00000576407 LIMCH1Q9UPQ0 1083 aa9.97□□□□□ -0.81
PRPF8-213ENST00000576407 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
PRPF8-213ENST00000576407 LOC285556D6RIA3 1793 aa9.96□□□□□ -0.81
PRPF8-213ENST00000576407 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 GOLGA8AA7E2F4 631 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 WDR46O15213 610 aaKnown RBP9.96□□□□□ -0.82
PRPF8-213ENST00000576407 LARGE1O95461 756 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 PARP1P09874 1014 aaKnown RBP9.96□□□□□ -0.82
PRPF8-213ENST00000576407 GOLGA8HP0CJ92 632 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CALM1P0DP23 149 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CALM2P0DP24 149 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CALM3P0DP25 149 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CETPP11597 493 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 BMP3P12645 472 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 RCAN1P53805 252 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 ZNF543Q08ER8 600 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 STK3Q13188 491 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 GRM4Q14833 912 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CCL15Q16663 113 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 ME3Q16798 604 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CCDC96Q2M329 555 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 FAM83BQ5T0W9 1011 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 KCTD1Q719H9 257 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 FASTKD5Q7L8L6 764 aaKnown RBP9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CCDC144CPQ8IYA2 1237 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 FANCBQ8NB91 859 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 DCAF4Q8WV16 495 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 BRI3BPQ8WY22 251 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 CAPNS2Q96L46 248 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 MAP3K14Q99558 947 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 MAD2L2Q9UI95 211 aa9.96□□□□□ -0.82
PRPF8-213ENST00000576407 FRMPD2Q68DX3 1309 aaPredicted RBP9.96□□□□□ -0.82
PRPF8-213ENST00000576407 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 MANSC4A6NHS7 340 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 KIF5BP33176 963 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 MCM2P49736 904 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 METAP2P50579 478 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 CCT2P78371 535 aaKnown RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 NOGQ13253 232 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 RTN1Q16799 776 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 ASPRV1Q53RT3 343 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 TREML2Q5T2D2 321 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 GPATCH4Q5T3I0 446 aaKnown RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 GPAT2Q6NUI2 795 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 STAG2Q8N3U4 1231 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 CTCFLQ8NI51 663 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 SNX21Q969T3 373 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 ZSCAN31Q96LW9 406 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 ZIC5Q96T25 663 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 SLKQ9H2G2 1235 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 NCOA5Q9HCD5 579 aaKnown RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 GPCPD1Q9NPB8 672 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 ISY1Q9ULR0 285 aaKnown RBP9.95□□□□□ -0.82
PRPF8-213ENST00000576407 AGTPBP1Q9UPW5 1226 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 NID2Q14112 1375 aa9.95□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L15C9J2P7 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 BTBD19C9JJ37 291 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L13C9JLJ4 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 TMEM232C9JQI7 657 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L11C9JVI0 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 KLRF2D3W0D1 207 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L18D6R9N7 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L22D6RA61 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L17D6RBQ6 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L19D6RCP7 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L20D6RJB6 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 PFKFB2O60825 505 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 AOC2O75106 756 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 CDC27P30260 824 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 HOXA7P31268 230 aaPredicted RBP9.94□□□□□ -0.82
PRPF8-213ENST00000576407 SLC16A2P36021 539 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 VEGFBP49765 207 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 INHBEP58166 350 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 KIF23Q02241 960 aaPredicted RBP9.94□□□□□ -0.82
PRPF8-213ENST00000576407 USP17L24Q0WX57 530 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 SCRN1Q12765 414 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 PPP2R5BQ15173 497 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 TTBK2Q6IQ55 1244 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 PTPN18Q99952 460 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
PRPF8-213ENST00000576407 SH2B1Q9NRF2 756 aaPredicted RBP9.94□□□□□ -0.82
PRPF8-213ENST00000576407 RBM28Q9NW13 759 aaKnown RBP9.94□□□□□ -0.82
PRPF8-213ENST00000576407 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
PRPF8-213ENST00000576407 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 PLA2G6O60733 806 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 FLOT1O75955 427 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
PRPF8-213ENST00000576407 GNAQP50148 359 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 STAT2P52630 851 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 ST3GAL1Q11201 340 aa9.93□□□□□ -0.82
PRPF8-213ENST00000576407 SREBF2Q12772 1141 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms