RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 TMOD4Q9NZQ9 345 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 ORC3Q9UBD5 711 aaPredicted RBP19.15■□□□□ 0.66
ERCC4-208ENST00000576348 MAD2L2Q9UI95 211 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 MYH8P13535 1937 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 PALM3A6NDB9 673 aaPredicted RBP19.14■□□□□ 0.65
ERCC4-208ENST00000576348 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
ERCC4-208ENST00000576348 PDCP20941 246 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 KCTD1Q719H9 257 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 CMTR1Q8N1G2 835 aaKnown RBP19.14■□□□□ 0.65
ERCC4-208ENST00000576348 WASF1Q92558 559 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 LPAR1Q92633 364 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 PHKBQ93100 1093 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 OTUD5Q96G74 571 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 CLMNQ96JQ2 1002 aa19.14■□□□□ 0.65
ERCC4-208ENST00000576348 C19orf81C9J6K1 198 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 DTNBO60941 627 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 CTDNEP1O95476 244 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 SNHG28P0DPA3 235 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 PPATQ06203 517 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 LDLRAD1Q5T700 205 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 STAG2Q8N3U4 1231 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 SMARCC2Q8TAQ2 1214 aa19.13■□□□□ 0.65
ERCC4-208ENST00000576348 RBM46Q8TBY0 533 aaKnown RBP19.13■□□□□ 0.65
ERCC4-208ENST00000576348 NUP88Q99567 741 aaPredicted RBP19.13■□□□□ 0.65
ERCC4-208ENST00000576348 RBM27Q9P2N5 1060 aaKnown RBP19.13■□□□□ 0.65
ERCC4-208ENST00000576348 SPDYE5A6NIY4 337 aa19.12■□□□□ 0.65
ERCC4-208ENST00000576348 FMNL1O95466 1100 aaPredicted RBP19.12■□□□□ 0.65
ERCC4-208ENST00000576348 BACE1P56817 501 aa19.12■□□□□ 0.65
ERCC4-208ENST00000576348 FAM83BQ5T0W9 1011 aa19.12■□□□□ 0.65
ERCC4-208ENST00000576348 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
ERCC4-208ENST00000576348 PIBF1Q8WXW3 757 aa19.12■□□□□ 0.65
ERCC4-208ENST00000576348 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
ERCC4-208ENST00000576348 UTRNP46939 3433 aa19.12■□□□□ 0.65
ERCC4-208ENST00000576348 GREB1LQ9C091 1923 aaPredicted RBP19.12■□□□□ 0.65
ERCC4-208ENST00000576348 STK36Q9NRP7 1315 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 TMEM232C9JQI7 657 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 TOMM70O94826 608 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 NTRK3Q16288 839 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 OPTNQ96CV9 577 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 RRP36Q96EU6 259 aaKnown RBP19.11■□□□□ 0.65
ERCC4-208ENST00000576348 RNF26Q9BY78 433 aaPredicted RBP19.11■□□□□ 0.65
ERCC4-208ENST00000576348 TANGO6Q9C0B7 1094 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 UBA5Q9GZZ9 404 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 VAT1LQ9HCJ6 419 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 AFG3L2Q9Y4W6 797 aa19.11■□□□□ 0.65
ERCC4-208ENST00000576348 V9GY48 417 aaPredicted RBP19.11■□□□□ 0.65
ERCC4-208ENST00000576348 H3BQV1 296 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 WDR46O15213 610 aaKnown RBP19.1■□□□□ 0.65
ERCC4-208ENST00000576348 DEXIO95424 95 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 FOSBP53539 338 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 HMGCS2P54868 508 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 HUNKP57058 714 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 PPIL2Q13356 520 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 TRIM29Q14134 588 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 IFFO2Q5TF58 517 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 LARP1BQ659C4 914 aaKnown RBP19.1■□□□□ 0.65
ERCC4-208ENST00000576348 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
ERCC4-208ENST00000576348 CHURC1Q8WUH1 139 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 SPZ1Q9BXG8 430 aa19.1■□□□□ 0.65
ERCC4-208ENST00000576348 CIZ1Q9ULV3 898 aaPredicted RBP19.1■□□□□ 0.65
ERCC4-208ENST00000576348 POLR2AP24928 1970 aaKnown RBP19.1■□□□□ 0.65
ERCC4-208ENST00000576348 PAPPA2Q9BXP8 1791 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 CNTNAP5Q8WYK1 1306 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 CXCL11O14625 94 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 PRPF3O43395 683 aaKnown RBP19.09■□□□□ 0.65
ERCC4-208ENST00000576348 XBP1P17861 261 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 SMARCA1P28370 1054 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 SLC16A2P36021 539 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 SYDE2Q5VT97 1194 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 FAM160B2Q86V87 743 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 HOMER1Q86YM7 354 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 ZNF784Q8NCA9 323 aaPredicted RBP19.09■□□□□ 0.65
ERCC4-208ENST00000576348 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 ALG1Q9BT22 464 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 CPVLQ9H3G5 476 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 EMILIN3Q9NT22 766 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 CHMP5Q9NZZ3 219 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 FEM1BQ9UK73 627 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 DOCK1Q14185 1865 aa19.09■□□□□ 0.65
ERCC4-208ENST00000576348 PDIA4P13667 645 aaKnown RBP19.08■□□□□ 0.64
ERCC4-208ENST00000576348 STAT2P52630 851 aa19.08■□□□□ 0.64
ERCC4-208ENST00000576348 KIAA1755Q5JYT7 1200 aa19.08■□□□□ 0.64
ERCC4-208ENST00000576348 CST9Q5W186 159 aa19.08■□□□□ 0.64
ERCC4-208ENST00000576348 GADL1Q6ZQY3 521 aa19.08■□□□□ 0.64
ERCC4-208ENST00000576348 NBPF11Q86T75 865 aa19.08■□□□□ 0.64
ERCC4-208ENST00000576348 C8orf76Q96K31 380 aa19.08■□□□□ 0.64
ERCC4-208ENST00000576348 RPAP3Q9H6T3 665 aaPredicted RBP19.08■□□□□ 0.64
ERCC4-208ENST00000576348 CTDP1Q9Y5B0 961 aaPredicted RBP19.08■□□□□ 0.64
ERCC4-208ENST00000576348 hCG_1642624A0A1W2PR95 340 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 VPS37CA5D8V6 355 aaPredicted RBP19.07■□□□□ 0.64
ERCC4-208ENST00000576348 VCAM1P19320 739 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 NUCB2P80303 420 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 FUT2Q10981 343 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 FSTL1Q12841 308 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 SNAPC2Q13487 334 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 KIFC2Q96AC6 838 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 C12orf42Q96LP6 360 aa19.07■□□□□ 0.64
ERCC4-208ENST00000576348 ABT1Q9ULW3 272 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms