RNA–Protein interactions for RNA: ENST00000575927.1

CYCSP40-201, Transcript of cytochrome c, somatic pseudogene 40, humanhuman

BASIC

Gene CYCSP40, Length 294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP40-201ENST00000575927 USP49Q70CQ1 688 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 SH3RF1Q7Z6J0 888 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 FCHSD1Q86WN1 690 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 FOXP4Q8IVH2 680 aaPredicted RBP5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 GRAMD1CQ8IYS0 662 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 SPATA20Q8TB22 786 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 CCDC12Q8WUD4 166 aaPredicted RBP5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 DPF2Q92785 391 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 GPKOWQ92917 476 aaPredicted RBP eCLIP5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 DYNLL2Q96FJ2 89 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 PAGE5Q96GU1 130 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 EPSTI1Q96J88 318 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 GPR101Q96P66 508 aaPredicted RBP5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 GSDMAQ96QA5 445 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 IL17RBQ9NRM6 502 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 LRRC4BQ9NT99 713 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 PODXL2Q9NZ53 605 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 NFE2L3Q9Y4A8 694 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 SIPA1L1O43166 1804 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 RGPD3A6NKT7 1758 aaPredicted RBP5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 RGPD4Q7Z3J3 1758 aa5.55□□□□□ -1.52
CYCSP40-201ENST00000575927 GAKO14976 1311 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 FLT1P17948 1338 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 FAM205AQ6ZU69 1335 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 A0A087X0B3 334 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 USP17L3A6NCW0 530 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 USP17L4A6NCW7 530 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 PALM3A6NDB9 673 aaPredicted RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 C6orf229H3BNL8 230 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 WNT7AO00755 349 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 PPEF1O14829 653 aaPredicted RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 CTIFO43310 598 aaKnown RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 ZNF18P17022 549 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 BMP6P22004 513 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 SMARCA1P28370 1054 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 MCM7P33993 719 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 LONP1P36776 959 aaKnown RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 CDK8P49336 464 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 FMR1Q06787 632 aaKnown RBP eCLIP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 DPYDQ12882 1025 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 GRIK5Q16478 980 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 GLIPR1L2Q4G1C9 344 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 NOM1Q5C9Z4 860 aaKnown RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 MFSD14BQ5SR56 506 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 SPATA1Q5VX52 437 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 USP17L1Q7RTZ2 530 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 KRT25Q7Z3Z0 450 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 HEATR3Q7Z4Q2 680 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 SP8Q8IXZ3 490 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 TRMT44Q8IYL2 757 aaKnown RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 STAG2Q8N3U4 1231 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 IQUBQ8NA54 791 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 SLC44A5Q8NCS7 719 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 NEDD1Q8NHV4 660 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 KIF18AQ8NI77 898 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 TBC1D16Q8TBP0 767 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 ZNF592Q92610 1267 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 FAM163AQ96GL9 167 aaPredicted RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 EYA3Q99504 573 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 TMEM47Q9BQJ4 181 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 SPZ1Q9BXG8 430 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 TRMT1Q9NXH9 659 aaKnown RBP5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 MAD2L2Q9UI95 211 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 C10orf71Q711Q0 1435 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 PLIN4Q96Q06 1357 aa5.54□□□□□ -1.52
CYCSP40-201ENST00000575927 SLX4Q8IY92 1834 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 TMEM232C9JQI7 657 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 KLRF2D3W0D1 207 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 hCG_1984214I3L0E3 225 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 STXBP3O00186 592 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 POLRMTO00411 1230 aaKnown RBP5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 LAD1O00515 517 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 ARHGAP6O43182 974 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 ZSCAN12O43309 604 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 PRPHP41219 470 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 STAT6P42226 847 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 RHBDL3P58872 404 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 SPAG1Q07617 926 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 DDR1Q08345 913 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 TBX2Q13207 712 aaPredicted RBP5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 ORC2Q13416 577 aaPredicted RBP5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 CUL4BQ13620 913 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 E2F4Q16254 413 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 FILIP1LQ4L180 1135 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 SOGA3Q5TF21 947 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 RRAGBQ5VZM2 374 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 WWC2Q6AWC2 1192 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 PDXDC2PQ6P474 469 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 SLC51AQ86UW1 340 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 ZNF713Q8N859 430 aaPredicted RBP5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 ANKRD20A12PQ8NF67 263 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 FBXO41Q8TF61 875 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 TSC1Q92574 1164 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 PPP1R13BQ96KQ4 1090 aa5.53□□□□□ -1.52
CYCSP40-201ENST00000575927 CTAGE1Q96RT6 745 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms