RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ZSCAN10Q96SZ4 725 aaPredicted RBP17.88■□□□□ 0.45
LITAF-217ENST00000575426 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
LITAF-217ENST00000575426 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 RBPJLQ9UBG7 517 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 MORF4L1Q9UBU8 362 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 CTDP1Q9Y5B0 961 aaPredicted RBP17.88■□□□□ 0.45
LITAF-217ENST00000575426 MYPNQ86TC9 1320 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 ERICH2A1L162 156 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 SPDYE16A6NNV3 312 aaPredicted RBP17.87■□□□□ 0.45
LITAF-217ENST00000575426 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
LITAF-217ENST00000575426 MCCP23508 829 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 ERVK-9P63128 1117 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 ERVK-24P63145 666 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 IKQ13123 557 aaPredicted RBP17.87■□□□□ 0.45
LITAF-217ENST00000575426 SART3Q15020 963 aaKnown RBP17.87■□□□□ 0.45
LITAF-217ENST00000575426 CHMP4CQ96CF2 233 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 ARHGAP39Q9C0H5 1083 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 KAT14Q9H8E8 782 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 CWC22Q9HCG8 908 aaKnown RBP17.87■□□□□ 0.45
LITAF-217ENST00000575426 FEM1BQ9UK73 627 aa17.87■□□□□ 0.45
LITAF-217ENST00000575426 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 MB21D1Q8N884 522 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 PRPF38AQ8NAV1 312 aaKnown RBP17.86■□□□□ 0.45
LITAF-217ENST00000575426 CHURC1Q8WUH1 139 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 DCAF4Q8WV16 495 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 COA7Q96BR5 231 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 SLF1Q9BQI6 1058 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 MCOLN1Q9GZU1 580 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 TNKSO95271 1327 aa17.86■□□□□ 0.45
LITAF-217ENST00000575426 TNPO2O14787 897 aaKnown RBP17.85■□□□□ 0.45
LITAF-217ENST00000575426 IFIT3O14879 490 aaKnown RBP17.85■□□□□ 0.45
LITAF-217ENST00000575426 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
LITAF-217ENST00000575426 PRMT2P55345 433 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 CCDC96Q2M329 555 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 IFIT1BQ5T764 474 aaKnown RBP17.85■□□□□ 0.45
LITAF-217ENST00000575426 FBXO46Q6PJ61 603 aaPredicted RBP17.85■□□□□ 0.45
LITAF-217ENST00000575426 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 NKX2-3Q8TAU0 364 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 ATG4CQ96DT6 458 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 TXNRD2Q9NNW7 524 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 FBXO28Q9NVF7 368 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 PPP1R9AQ9ULJ8 1098 aa17.85■□□□□ 0.45
LITAF-217ENST00000575426 ZNFX1Q9P2E3 1918 aaKnown RBP17.84■□□□□ 0.45
LITAF-217ENST00000575426 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 MAPK4P31152 587 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 STAT2P52630 851 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 KRT32Q14532 448 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 PLS1Q14651 629 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 Q3C1V9 767 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
LITAF-217ENST00000575426 ANKS1AQ92625 1134 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 KIFC2Q96AC6 838 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 TRIM47Q96LD4 638 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 TAF6LQ9Y6J9 622 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 A0A0G2JMZ2 1700 aa17.84■□□□□ 0.45
LITAF-217ENST00000575426 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
LITAF-217ENST00000575426 PEX10O60683 326 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 ZBED4O75132 1171 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 CNMDO75829 334 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 MCM5P33992 734 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 WTAPQ15007 396 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 WDR78Q5VTH9 848 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 KCTD1Q719H9 257 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 BTBD7Q9P203 1132 aa17.83■□□□□ 0.44
LITAF-217ENST00000575426 VWA5AO00534 786 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 FDX1P10109 184 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 CTGFP29279 349 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 CHST3Q7LGC8 479 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 MB21D2Q8IYB1 491 aaPredicted RBP17.82■□□□□ 0.44
LITAF-217ENST00000575426 RAET1EQ8TD07 263 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 SPATC1LQ9H0A9 340 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 SRRDQ9UH36 339 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 ADAMTS5Q9UNA0 930 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 MYH6P13533 1939 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
LITAF-217ENST00000575426 PRC1O43663 620 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 PLA2G6O60733 806 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 PDHBP11177 359 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 CAP1Q01518 475 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 TSGA10IPQ3SY00 556 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 TMEM67Q5HYA8 995 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 POTEEQ6S8J3 1075 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 NEK1Q96PY6 1258 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 MTA3Q9BTC8 594 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 GPCPD1Q9NPB8 672 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 IVNS1ABPQ9Y6Y0 642 aa17.81■□□□□ 0.44
LITAF-217ENST00000575426 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
LITAF-217ENST00000575426 SLC25A27O95847 323 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 HSPA4P34932 840 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 STAT3P40763 770 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 TMEM132BQ14DG7 1078 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 SEC23AQ15436 765 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
LITAF-217ENST00000575426 PLEKHH3Q7Z736 793 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms