RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
SMG6-216ENST00000575176 F5H6K3 240 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 HIP1O00291 1037 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 TNPO2O14787 897 aaKnown RBP10.3□□□□□ -0.76
SMG6-216ENST00000575176 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
SMG6-216ENST00000575176 TTLL1O95922 423 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 CYP21A2P08686 494 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 ELNP15502 786 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 KLRC3Q07444 240 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 TRIM32Q13049 653 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 GRB14Q14449 540 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMG6-216ENST00000575176 UBE2Q1Q7Z7E8 422 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 GPRC5AQ8NFJ5 357 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 MOV10L1Q9BXT6 1211 aaKnown RBP10.3□□□□□ -0.76
SMG6-216ENST00000575176 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 LSG1Q9H089 658 aaKnown RBP10.3□□□□□ -0.76
SMG6-216ENST00000575176 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 TCP11L1Q9NUJ3 509 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 FLRT1Q9NZU1 646 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 ZNF536O15090 1300 aa10.3□□□□□ -0.76
SMG6-216ENST00000575176 VWA5AO00534 786 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 FLOT1O75955 427 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 HOXC6P09630 235 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 TSPY3P0CV98 308 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 TSPY8P0CW00 308 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 GRK4P32298 578 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 COG2Q14746 738 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 KIF22Q14807 665 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 CCL14Q16627 93 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 SLC9C1Q4G0N8 1177 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 SHCBP1Q8NEM2 672 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 FGD4Q96M96 766 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
SMG6-216ENST00000575176 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
SMG6-216ENST00000575176 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 ATP2A1O14983 1001 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 ADCY3O60266 1144 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 INHAP05111 366 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 PCP11498 1178 aaKnown RBP10.28□□□□□ -0.76
SMG6-216ENST00000575176 MAPK4P31152 587 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
SMG6-216ENST00000575176 ANTXR2P58335 489 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 SEC23AQ15436 765 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 CYB5R4Q7L1T6 521 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
SMG6-216ENST00000575176 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 MAP4K1Q92918 833 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 TMEM47Q9BQJ4 181 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 ESYT1Q9BSJ8 1104 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 ZNF287Q9HBT7 754 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 RIPK3Q9Y572 518 aa10.28□□□□□ -0.76
SMG6-216ENST00000575176 LAMA2P24043 3122 aaKnown RBP10.27□□□□□ -0.76
SMG6-216ENST00000575176 TSPY2A6NKD2 308 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 B4E1Z4 1266 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 RANBP6O60518 1105 aaKnown RBP10.27□□□□□ -0.77
SMG6-216ENST00000575176 PLA2G6O60733 806 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 XRCC5P13010 732 aaKnown RBP10.27□□□□□ -0.77
SMG6-216ENST00000575176 TAL1P17542 331 aaPredicted RBP10.27□□□□□ -0.77
SMG6-216ENST00000575176 ERCC3P19447 782 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 PTPREP23469 700 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
SMG6-216ENST00000575176 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 PLEKHH3Q7Z736 793 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 RIOX2Q8IUF8 465 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 MB21D1Q8N884 522 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 ENAHQ8N8S7 591 aaPredicted RBP10.27□□□□□ -0.77
SMG6-216ENST00000575176 NPLOC4Q8TAT6 608 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 SOCS4Q8WXH5 440 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 APBA2Q99767 749 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 SLF1Q9BQI6 1058 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 ASTN1O14525 1302 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 SZT2Q5T011 3432 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
SMG6-216ENST00000575176 DNAJC25-GNG10A0A024R161 153 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 COBLO75128 1261 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 KDM4AO75164 1064 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
SMG6-216ENST00000575176 PDHBP11177 359 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 CCL5P13501 91 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
SMG6-216ENST00000575176 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 BTNL9Q6UXG8 535 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 MB21D2Q8IYB1 491 aaPredicted RBP10.26□□□□□ -0.77
SMG6-216ENST00000575176 TRPV1Q8NER1 839 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 RAET1EQ8TD07 263 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 COA7Q96BR5 231 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
SMG6-216ENST00000575176 STX8Q9UNK0 236 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms