RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 FDX1P10109 184 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 CPA1P15085 419 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 IRX3P78415 501 aaPredicted RBP14.5□□□□□ -0.09
CXCL16-204ENST00000575168 CYP4F22Q6NT55 531 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 APOA5Q6Q788 366 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 ANKRD23Q86SG2 305 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 CCDC84Q86UT8 332 aaPredicted RBP14.5□□□□□ -0.09
CXCL16-204ENST00000575168 SIAH1Q8IUQ4 282 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 NUP133Q8WUM0 1156 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 TANGO6Q9C0B7 1094 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 SH2B1Q9NRF2 756 aaPredicted RBP14.5□□□□□ -0.09
CXCL16-204ENST00000575168 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 HOXC10Q9NYD6 342 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.5□□□□□ -0.09
CXCL16-204ENST00000575168 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 LIMCH1Q9UPQ0 1083 aa14.5□□□□□ -0.09
CXCL16-204ENST00000575168 TESPA1A2RU30 521 aaPredicted RBP14.49□□□□□ -0.09
CXCL16-204ENST00000575168 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 FAM155AB1AL88 458 aaPredicted RBP14.49□□□□□ -0.09
CXCL16-204ENST00000575168 VCAM1P19320 739 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 HOXA7P31268 230 aaPredicted RBP14.49□□□□□ -0.09
CXCL16-204ENST00000575168 GJA5P36382 358 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 METAP2P50579 478 aaKnown RBP eCLIP14.49□□□□□ -0.09
CXCL16-204ENST00000575168 STAT2P52630 851 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 MKRN3Q13064 507 aaKnown RBP14.49□□□□□ -0.09
CXCL16-204ENST00000575168 TRAF1Q13077 416 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 SPICE1Q8N0Z3 855 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 TCEANC2Q96MN5 208 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 KIF2CQ99661 725 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 RPAP3Q9H6T3 665 aaPredicted RBP14.49□□□□□ -0.09
CXCL16-204ENST00000575168 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 LOC285556D6RIA3 1793 aa14.49□□□□□ -0.09
CXCL16-204ENST00000575168 MYPNQ86TC9 1320 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 GOLGA8AA7E2F4 631 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 CPLX1O14810 134 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 PLA2G6O60733 806 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 CDKL5O76039 1030 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 PDHBP11177 359 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 TM4SF4P48230 202 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 AK2P54819 239 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 EVCP57679 992 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 APOBRQ0VD83 1088 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 COG2Q14746 738 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 RTN1Q16799 776 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 MICU3Q86XE3 530 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 PRPF38AQ8NAV1 312 aaKnown RBP14.48□□□□□ -0.09
CXCL16-204ENST00000575168 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 MS4A4AQ96JQ5 239 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 PARK7Q99497 189 aaKnown RBP14.48□□□□□ -0.09
CXCL16-204ENST00000575168 BEGAINQ9BUH8 593 aa14.48□□□□□ -0.09
CXCL16-204ENST00000575168 SLKQ9H2G2 1235 aaPredicted RBP14.48□□□□□ -0.09
CXCL16-204ENST00000575168 FLOT1O75955 427 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 SNHG28P0DPA3 235 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 VEGFBP49765 207 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 KIF23Q02241 960 aaPredicted RBP14.47□□□□□ -0.09
CXCL16-204ENST00000575168 MAP2K1Q02750 393 aaPredicted RBP14.47□□□□□ -0.09
CXCL16-204ENST00000575168 ZNF543Q08ER8 600 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 TROAPQ12815 778 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 TOB2Q14106 344 aaPredicted RBP14.47□□□□□ -0.09
CXCL16-204ENST00000575168 GRM4Q14833 912 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 FAM83BQ5T0W9 1011 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 MB21D1Q8N884 522 aa14.47□□□□□ -0.09
CXCL16-204ENST00000575168 RBM27Q9P2N5 1060 aaKnown RBP14.47□□□□□ -0.09
CXCL16-204ENST00000575168 TMEM232C9JQI7 657 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 KLRF2D3W0D1 207 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 PDHXO00330 501 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 GCLCP48506 637 aaPredicted RBP14.46□□□□□ -0.09
CXCL16-204ENST00000575168 AKAP17AQ02040 695 aaKnown RBP14.46□□□□□ -0.09
CXCL16-204ENST00000575168 CATSPERGQ6ZRH7 1159 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 IFNL1Q8IU54 200 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 NKX2-3Q8TAU0 364 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 SMCR8Q8TEV9 937 aaPredicted RBP14.46□□□□□ -0.09
CXCL16-204ENST00000575168 BRI3BPQ8WY22 251 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 SLF1Q9BQI6 1058 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 GPCPD1Q9NPB8 672 aa14.46□□□□□ -0.09
CXCL16-204ENST00000575168 PALM3A6NDB9 673 aaPredicted RBP14.45□□□□□ -0.1
CXCL16-204ENST00000575168 BTBD19C9JJ37 291 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 CA12O43570 354 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 ZBED4O75132 1171 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 PDIA3P30101 505 aaKnown RBP14.45□□□□□ -0.1
CXCL16-204ENST00000575168 BECN1Q14457 450 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 TRIM22Q8IYM9 498 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 ZFYVE28Q9HCC9 887 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 GPHNQ9NQX3 736 aaPredicted RBP14.45□□□□□ -0.1
CXCL16-204ENST00000575168 SEC63Q9UGP8 760 aaKnown RBP14.45□□□□□ -0.1
CXCL16-204ENST00000575168 BRPF3Q9ULD4 1205 aa14.45□□□□□ -0.1
CXCL16-204ENST00000575168 PFKFB2O60825 505 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 TAF1CQ15572 869 aaPredicted RBP14.44□□□□□ -0.1
CXCL16-204ENST00000575168 SYDE2Q5VT97 1194 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 BTNL9Q6UXG8 535 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 SNX21Q969T3 373 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 KIFC2Q96AC6 838 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 SPZ1Q9BXG8 430 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 ASCC2Q9H1I8 757 aaPredicted RBP14.44□□□□□ -0.1
CXCL16-204ENST00000575168 KIF3AQ9Y496 699 aa14.44□□□□□ -0.1
CXCL16-204ENST00000575168 NID2Q14112 1375 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms