RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SYMPKQ92797 1274 aaKnown RBP16.03■□□□□ 0.16
VPS33B-208ENST00000574755 TEKT1Q969V4 418 aa16.03■□□□□ 0.16
VPS33B-208ENST00000574755 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
VPS33B-208ENST00000574755 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
VPS33B-208ENST00000574755 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
VPS33B-208ENST00000574755 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 LRMPQ12912 555 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 PODNQ7Z5L7 613 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 SMARCE1Q969G3 411 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 DHX58Q96C10 678 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 BARHL2Q9NY43 387 aa16.02■□□□□ 0.16
VPS33B-208ENST00000574755 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-208ENST00000574755 MYL5Q02045 173 aa16.02■□□□□ 0.15
VPS33B-208ENST00000574755 GRAMD1CQ8IYS0 662 aa16.02■□□□□ 0.15
VPS33B-208ENST00000574755 RASGRP4Q8TDF6 673 aa16.02■□□□□ 0.15
VPS33B-208ENST00000574755 SPZ1Q9BXG8 430 aa16.02■□□□□ 0.15
VPS33B-208ENST00000574755 CPVLQ9H3G5 476 aa16.02■□□□□ 0.15
VPS33B-208ENST00000574755 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-208ENST00000574755 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.15
VPS33B-208ENST00000574755 SMC2O95347 1197 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 GABPAQ06546 454 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 SERPINB13Q9UIV8 391 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 A0A087X0B3 334 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 CCDC194A0A1B0GVG4 234 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 STXBP3O00186 592 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 NT5DC1Q5TFE4 455 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 CDC42EP5Q6NZY7 148 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
VPS33B-208ENST00000574755 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
VPS33B-208ENST00000574755 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 BMP6P22004 513 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 GALNT17Q6IS24 598 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 STYK1Q6J9G0 422 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
VPS33B-208ENST00000574755 XPO4Q9C0E2 1151 aaKnown RBP16■□□□□ 0.15
VPS33B-208ENST00000574755 OSBPL5Q9H0X9 879 aaPredicted RBP16■□□□□ 0.15
VPS33B-208ENST00000574755 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 MTMR4Q9NYA4 1195 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 M0R2N6 131 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 NOVP48745 357 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 APOBEC3HQ6NTF7 200 aaKnown RBP16■□□□□ 0.15
VPS33B-208ENST00000574755 RRP36Q96EU6 259 aaKnown RBP16■□□□□ 0.15
VPS33B-208ENST00000574755 SEC63Q9UGP8 760 aaKnown RBP16■□□□□ 0.15
VPS33B-208ENST00000574755 PCDHA6Q9UN73 950 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 PCDHA8Q9Y5H6 950 aa16■□□□□ 0.15
VPS33B-208ENST00000574755 SLFN14P0C7P3 912 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 AKR1B1P15121 316 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 CRKP46108 304 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 SARSP49591 514 aaKnown RBP15.99■□□□□ 0.15
VPS33B-208ENST00000574755 KIAA0825Q8IV33 1275 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 DAGLBQ8NCG7 672 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-208ENST00000574755 SWAP70Q9UH65 585 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 USP17L5A8MUK1 530 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 CHRNA5P30532 468 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 AFMP43652 599 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 NAPAP54920 295 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
VPS33B-208ENST00000574755 LRRC8AQ8IWT6 810 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 TRIML1Q8N9V2 468 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 CCDC12Q8WUD4 166 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-208ENST00000574755 HSD3B7Q9H2F3 369 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 DACH1Q9UI36 760 aa15.99■□□□□ 0.15
VPS33B-208ENST00000574755 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 PDHBP11177 359 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 ATP1A3P13637 1013 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 SLC15A2Q16348 729 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
VPS33B-208ENST00000574755 FAM177A1Q8N128 213 aaPredicted RBP15.98■□□□□ 0.15
VPS33B-208ENST00000574755 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
VPS33B-208ENST00000574755 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 ECE2O60344 883 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 SMARCA1P28370 1054 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 FANCCQ00597 558 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 NFIAQ12857 509 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 MORC3Q14149 939 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 INF2Q27J81 1249 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 STRIP1Q5VSL9 837 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 SPATA20Q8TB22 786 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 ZMYND12Q9H0C1 365 aa15.98■□□□□ 0.15
VPS33B-208ENST00000574755 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-208ENST00000574755 NEMFO60524 1076 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 RBM5P52756 815 aaKnown RBP eCLIP15.97■□□□□ 0.15
VPS33B-208ENST00000574755 ARID5BQ14865 1188 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
VPS33B-208ENST00000574755 IL17AQ16552 155 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 CLEC10AQ8IUN9 316 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 CNKSR1Q969H4 720 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 ZDHHC15Q96MV8 337 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms