RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 NMIQ13287 307 aaPredicted RBP23.44■■□□□ 1.34
SCARF1-208ENST00000574545 ZNF589Q86UQ0 364 aaPredicted RBP23.44■■□□□ 1.34
SCARF1-208ENST00000574545 APBA2Q99767 749 aa23.44■■□□□ 1.34
SCARF1-208ENST00000574545 HMX1Q9NP08 348 aaPredicted RBP23.44■■□□□ 1.34
SCARF1-208ENST00000574545 CLIP2Q9UDT6 1046 aa23.44■■□□□ 1.34
SCARF1-208ENST00000574545 TRIM6-TRIM34B2RNG4 842 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 IGHA2P01877 340 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 FGRP09769 529 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 FAM47AQ5JRC9 791 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 FAM83BQ5T0W9 1011 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 INCENPQ9NQS7 918 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 SYNPO2Q9UMS6 1093 aa23.43■■□□□ 1.34
SCARF1-208ENST00000574545 NDUFB10O96000 172 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 FGAP02671 866 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 SLC3A2P08195 630 aaKnown RBP23.42■■□□□ 1.34
SCARF1-208ENST00000574545 HSPD1P10809 573 aaKnown RBP23.42■■□□□ 1.34
SCARF1-208ENST00000574545 ERCC3P19447 782 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 SDSP20132 328 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 TFAP4Q01664 338 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 CTDSPL2Q05D32 466 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 CACNB2Q08289 660 aaPredicted RBP23.42■■□□□ 1.34
SCARF1-208ENST00000574545 TMEM132BQ14DG7 1078 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 REPS2Q8NFH8 660 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 RILPL2Q969X0 211 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 FLRT1Q9NZU1 646 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 PPP1R9AQ9ULJ8 1098 aa23.42■■□□□ 1.34
SCARF1-208ENST00000574545 STRNO43815 780 aa23.41■■□□□ 1.34
SCARF1-208ENST00000574545 TTLL1O95922 423 aa23.41■■□□□ 1.34
SCARF1-208ENST00000574545 PRKAR2AP13861 404 aaKnown RBP23.41■■□□□ 1.34
SCARF1-208ENST00000574545 ZKSCAN1P17029 563 aaPredicted RBP23.41■■□□□ 1.34
SCARF1-208ENST00000574545 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
SCARF1-208ENST00000574545 WDR78Q5VTH9 848 aa23.41■■□□□ 1.34
SCARF1-208ENST00000574545 NPLOC4Q8TAT6 608 aa23.41■■□□□ 1.34
SCARF1-208ENST00000574545 NUP88Q99567 741 aaPredicted RBP23.41■■□□□ 1.34
SCARF1-208ENST00000574545 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
SCARF1-208ENST00000574545 VWA5AO00534 786 aa23.4■■□□□ 1.34
SCARF1-208ENST00000574545 TFRCP02786 760 aaKnown RBP23.4■■□□□ 1.34
SCARF1-208ENST00000574545 TSPY3P0CV98 308 aa23.4■■□□□ 1.34
SCARF1-208ENST00000574545 TSPY8P0CW00 308 aa23.4■■□□□ 1.34
SCARF1-208ENST00000574545 PDE4AP27815 886 aa23.4■■□□□ 1.34
SCARF1-208ENST00000574545 MROH8Q9H579 483 aa23.4■■□□□ 1.34
SCARF1-208ENST00000574545 ZNF214Q9UL59 606 aaPredicted RBP23.4■■□□□ 1.34
SCARF1-208ENST00000574545 IVNS1ABPQ9Y6Y0 642 aa23.4■■□□□ 1.34
SCARF1-208ENST00000574545 ZMYM6O95789 1325 aa23.39■■□□□ 1.34
SCARF1-208ENST00000574545 FARP2O94887 1054 aaPredicted RBP23.39■■□□□ 1.33
SCARF1-208ENST00000574545 GMCL1P1Q8NEA9 526 aa23.39■■□□□ 1.33
SCARF1-208ENST00000574545 IL17RBQ9NRM6 502 aa23.39■■□□□ 1.33
SCARF1-208ENST00000574545 MYH4Q9Y623 1939 aa23.39■■□□□ 1.33
SCARF1-208ENST00000574545 CCDC171Q6TFL3 1326 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 ORC4O43929 436 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 RAD21O60216 631 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 ADORA2AP29274 412 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 NOVP48745 357 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 MNX1P50219 401 aaPredicted RBP23.38■■□□□ 1.33
SCARF1-208ENST00000574545 PLS1Q14651 629 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 RIOX2Q8IUF8 465 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 ABRAQ8N0Z2 381 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 OGDHLQ9ULD0 1010 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 COL11A1P12107 1806 aaPredicted RBP23.38■■□□□ 1.33
SCARF1-208ENST00000574545 ZNF236Q9UL36 1845 aa23.38■■□□□ 1.33
SCARF1-208ENST00000574545 CEP290O15078 2479 aa23.37■■□□□ 1.33
SCARF1-208ENST00000574545 COBLO75128 1261 aa23.37■■□□□ 1.33
SCARF1-208ENST00000574545 SLC25A27O95847 323 aa23.37■■□□□ 1.33
SCARF1-208ENST00000574545 CCND3P30281 292 aaPredicted RBP23.37■■□□□ 1.33
SCARF1-208ENST00000574545 SAMD1Q6SPF0 538 aaPredicted RBP23.37■■□□□ 1.33
SCARF1-208ENST00000574545 NCAPG2Q86XI2 1143 aa23.37■■□□□ 1.33
SCARF1-208ENST00000574545 LRRC47Q8N1G4 583 aaKnown RBP23.37■■□□□ 1.33
SCARF1-208ENST00000574545 ANKLE1Q8NAG6 615 aa23.37■■□□□ 1.33
SCARF1-208ENST00000574545 SLF1Q9BQI6 1058 aa23.37■■□□□ 1.33
SCARF1-208ENST00000574545 STAT3P40763 770 aa23.36■■□□□ 1.33
SCARF1-208ENST00000574545 LHX8Q68G74 356 aa23.36■■□□□ 1.33
SCARF1-208ENST00000574545 PRPF38AQ8NAV1 312 aaKnown RBP23.36■■□□□ 1.33
SCARF1-208ENST00000574545 SLFN13Q68D06 897 aa23.35■■□□□ 1.33
SCARF1-208ENST00000574545 DPP9Q86TI2 863 aa23.35■■□□□ 1.33
SCARF1-208ENST00000574545 NBPF3Q9H094 633 aa23.35■■□□□ 1.33
SCARF1-208ENST00000574545 TSPY2A6NKD2 308 aa23.34■■□□□ 1.33
SCARF1-208ENST00000574545 NMT2O60551 498 aa23.34■■□□□ 1.33
SCARF1-208ENST00000574545 MFSD14CQ5VZR4 134 aa23.34■■□□□ 1.33
SCARF1-208ENST00000574545 OLFML2BQ68BL8 750 aa23.34■■□□□ 1.33
SCARF1-208ENST00000574545 DIS3LQ8TF46 1054 aaKnown RBP23.34■■□□□ 1.33
SCARF1-208ENST00000574545 PAWRQ96IZ0 340 aaKnown RBP23.34■■□□□ 1.33
SCARF1-208ENST00000574545 FEM1BQ9UK73 627 aa23.34■■□□□ 1.33
SCARF1-208ENST00000574545 ATP2A1O14983 1001 aa23.33■■□□□ 1.33
SCARF1-208ENST00000574545 RANBP6O60518 1105 aaKnown RBP23.33■■□□□ 1.33
SCARF1-208ENST00000574545 BMP3P12645 472 aa23.33■■□□□ 1.33
SCARF1-208ENST00000574545 CYP2C19P33261 490 aa23.33■■□□□ 1.33
SCARF1-208ENST00000574545 PPP4R3BQ5MIZ7 849 aa23.33■■□□□ 1.33
SCARF1-208ENST00000574545 CWC27Q6UX04 472 aaKnown RBP23.33■■□□□ 1.33
SCARF1-208ENST00000574545 HTATIP2Q9BUP3 242 aa23.33■■□□□ 1.33
SCARF1-208ENST00000574545 ZNFX1Q9P2E3 1918 aaKnown RBP23.33■■□□□ 1.32
SCARF1-208ENST00000574545 FCER1AP12319 257 aa23.32■■□□□ 1.32
SCARF1-208ENST00000574545 GSPT1P15170 499 aaKnown RBP23.32■■□□□ 1.32
SCARF1-208ENST00000574545 MFAP1P55081 439 aaKnown RBP23.32■■□□□ 1.32
SCARF1-208ENST00000574545 TRPV1Q8NER1 839 aa23.32■■□□□ 1.32
SCARF1-208ENST00000574545 GMCL1Q96IK5 515 aa23.32■■□□□ 1.32
SCARF1-208ENST00000574545 SLC38A10Q9HBR0 1119 aa23.32■■□□□ 1.32
SCARF1-208ENST00000574545 RIPK3Q9Y572 518 aa23.32■■□□□ 1.32
SCARF1-208ENST00000574545 HIP1O00291 1037 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 COPB2P35606 906 aa23.31■■□□□ 1.32
SCARF1-208ENST00000574545 HAND2P61296 217 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms