RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 IFNAR1P17181 557 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 RNF187Q5TA31 235 aaPredicted RBP16.15■□□□□ 0.18
SMG6-215ENST00000574501 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 NELFBQ8WX92 580 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 AATFQ9NY61 560 aaKnown RBP eCLIP16.15■□□□□ 0.18
SMG6-215ENST00000574501 PHF8Q9UPP1 1060 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 NFAT5O94916 1531 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 MYO5AQ9Y4I1 1855 aaKnown RBP16.15■□□□□ 0.18
SMG6-215ENST00000574501 STK36Q9NRP7 1315 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 FSBPO95073 299 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 KRT14P02533 472 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 CTDSPL2Q05D32 466 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 EARS2Q5JPH6 523 aaKnown RBP16.15■□□□□ 0.18
SMG6-215ENST00000574501 CCDC70Q6NSX1 233 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 SGMS1Q86VZ5 419 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
SMG6-215ENST00000574501 PSMB7Q99436 277 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 CENPHQ9H3R5 247 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 SMARCAL1Q9NZC9 954 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.18
SMG6-215ENST00000574501 WNT7AO00755 349 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 KIF1CO43896 1103 aaKnown RBP16.14■□□□□ 0.17
SMG6-215ENST00000574501 GUCY1A3Q02108 690 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 DDR1Q08345 913 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 PAK1Q13153 545 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 TSR1Q2NL82 804 aaKnown RBP16.14■□□□□ 0.17
SMG6-215ENST00000574501 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
SMG6-215ENST00000574501 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
SMG6-215ENST00000574501 SKOR1P84550 965 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 PPARDQ03181 441 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
SMG6-215ENST00000574501 RWDD2AQ9UIY3 292 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
SMG6-215ENST00000574501 TRIM49BA6NDI0 452 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 TRIM75PA6NK02 468 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 HSF2BPO75031 334 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 RDXP35241 583 aaKnown RBP16.13■□□□□ 0.17
SMG6-215ENST00000574501 KRT83P78385 493 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 APBA1Q02410 837 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
SMG6-215ENST00000574501 CREG2Q8IUH2 290 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 ZIM3Q96PE6 472 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 AGPAT5Q9NUQ2 364 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 EHD2Q9NZN4 543 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 XDHP47989 1333 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
SMG6-215ENST00000574501 KCNA6P17658 529 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 SPAG1Q07617 926 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 NNTQ13423 1086 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 RTN1Q16799 776 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 LMOD2Q6P5Q4 547 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 EHBP1Q8NDI1 1231 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 RNPC3Q96LT9 517 aaKnown RBP16.13■□□□□ 0.17
SMG6-215ENST00000574501 DNAJC7Q99615 494 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 GDAQ9Y2T3 454 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 TACC3Q9Y6A5 838 aa16.13■□□□□ 0.17
SMG6-215ENST00000574501 hCG_1642624A0A1W2PR95 340 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 CXCR5P32302 372 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 MCAMP43121 646 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 ACTN3Q08043 901 aaPredicted RBP16.12■□□□□ 0.17
SMG6-215ENST00000574501 NAA35Q5VZE5 725 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 IQCEQ6IPM2 695 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 MB21D1Q8N884 522 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 NUP133Q8WUM0 1156 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
SMG6-215ENST00000574501 KLC4Q9NSK0 619 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
SMG6-215ENST00000574501 CIAO1O76071 339 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
SMG6-215ENST00000574501 EPB41P11171 864 aaKnown RBP16.11■□□□□ 0.17
SMG6-215ENST00000574501 LSP1P33241 339 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 ADD2P35612 726 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 SEC24CP53992 1094 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
SMG6-215ENST00000574501 ZNF174Q15697 407 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 IRF2BP1Q8IU81 584 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 N4BP2L2Q92802 583 aaPredicted RBP16.11■□□□□ 0.17
SMG6-215ENST00000574501 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 EEF2KMTQ96G04 330 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMG6-215ENST00000574501 NHEJ1Q9H9Q4 299 aaPredicted RBP16.11■□□□□ 0.17
SMG6-215ENST00000574501 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 ARFGEF2Q9Y6D5 1785 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 CHUKO15111 745 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 DEXIO95424 95 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 LIFRP42702 1097 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 NEDD9Q14511 834 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 MMGT1Q8N4V1 131 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 CRACR2BQ8N4Y2 399 aaPredicted RBP16.11■□□□□ 0.17
SMG6-215ENST00000574501 SPATA4Q8NEY3 305 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 MTRQ99707 1265 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 MCM8Q9UJA3 840 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
SMG6-215ENST00000574501 TBX22Q9Y458 520 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms