RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FMNL1O95466 1100 aaPredicted RBP27.92■■■□□ 2.06
ATPAF1-213ENST00000574428 GNAQP50148 359 aa27.92■■■□□ 2.06
ATPAF1-213ENST00000574428 GMCL1Q96IK5 515 aa27.92■■■□□ 2.06
ATPAF1-213ENST00000574428 CLMNQ96JQ2 1002 aa27.92■■■□□ 2.06
ATPAF1-213ENST00000574428 CNTNAP5Q8WYK1 1306 aa27.92■■■□□ 2.06
ATPAF1-213ENST00000574428 PHIPQ8WWQ0 1821 aa27.92■■■□□ 2.06
ATPAF1-213ENST00000574428 PKP1Q13835 747 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 SLC35G1Q2M3R5 365 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 ANKRD13AQ8IZ07 590 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 WDR18Q9BV38 432 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 VCPKMTQ9H867 229 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 AS3MTQ9HBK9 375 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 ITGBL1O95965 494 aaPredicted RBP27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 SPP2Q13103 211 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 MTMR2Q13614 643 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 TRIM22Q8IYM9 498 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 ZNF280CQ8ND82 737 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 ELP3Q9H9T3 547 aa27.91■■■□□ 2.06
ATPAF1-213ENST00000574428 STK36Q9NRP7 1315 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 hCG_1642624A0A1W2PR95 340 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 TRIM75PA6NK02 468 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 CELF2O95319 508 aaKnown RBP27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 FOSBP53539 338 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 TTBK2Q6IQ55 1244 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 CNKSR2Q8WXI2 1034 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 LZTS2Q9BRK4 669 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 UBA5Q9GZZ9 404 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 KIAA1683Q9H0B3 1180 aa27.9■■■□□ 2.06
ATPAF1-213ENST00000574428 CYTH3O43739 400 aa27.89■■■□□ 2.06
ATPAF1-213ENST00000574428 DGKZQ13574 1117 aa27.89■■■□□ 2.06
ATPAF1-213ENST00000574428 GPATCH4Q5T3I0 446 aaKnown RBP27.89■■■□□ 2.06
ATPAF1-213ENST00000574428 PIBF1Q8WXW3 757 aa27.89■■■□□ 2.06
ATPAF1-213ENST00000574428 RNF26Q9BY78 433 aaPredicted RBP27.89■■■□□ 2.06
ATPAF1-213ENST00000574428 USP17L10C9JJH3 530 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 KIF3CO14782 793 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 SYT1P21579 422 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 LARP1BQ659C4 914 aaKnown RBP27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 AIFM3Q96NN9 605 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 CHMP5Q9NZZ3 219 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 CIZ1Q9ULV3 898 aaPredicted RBP27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 V9GY48 417 aaPredicted RBP27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 BMP3P12645 472 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 GBA2Q9HCG7 927 aaPredicted RBP27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 KIF3AQ9Y496 699 aa27.88■■■□□ 2.05
ATPAF1-213ENST00000574428 SLC16A2P36021 539 aa27.87■■■□□ 2.05
ATPAF1-213ENST00000574428 AKAP17AQ02040 695 aaKnown RBP27.87■■■□□ 2.05
ATPAF1-213ENST00000574428 FAM83BQ5T0W9 1011 aa27.87■■■□□ 2.05
ATPAF1-213ENST00000574428 LDLRAD1Q5T700 205 aa27.87■■■□□ 2.05
ATPAF1-213ENST00000574428 SPZ1Q9BXG8 430 aa27.87■■■□□ 2.05
ATPAF1-213ENST00000574428 AFG3L2Q9Y4W6 797 aa27.87■■■□□ 2.05
ATPAF1-213ENST00000574428 PRPF3O43395 683 aaKnown RBP27.86■■■□□ 2.05
ATPAF1-213ENST00000574428 BACE1P56817 501 aa27.86■■■□□ 2.05
ATPAF1-213ENST00000574428 DEXIO95424 95 aa27.86■■■□□ 2.05
ATPAF1-213ENST00000574428 PDCP20941 246 aa27.86■■■□□ 2.05
ATPAF1-213ENST00000574428 ALG1Q9BT22 464 aa27.86■■■□□ 2.05
ATPAF1-213ENST00000574428 VAT1LQ9HCJ6 419 aa27.86■■■□□ 2.05
ATPAF1-213ENST00000574428 OTUD5Q96G74 571 aa27.85■■■□□ 2.05
ATPAF1-213ENST00000574428 EMILIN3Q9NT22 766 aa27.85■■■□□ 2.05
ATPAF1-213ENST00000574428 GJB4Q9NTQ9 266 aa27.85■■■□□ 2.05
ATPAF1-213ENST00000574428 BAZ2BQ9UIF8 2168 aaKnown RBP27.85■■■□□ 2.05
ATPAF1-213ENST00000574428 TMEM232C9JQI7 657 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 STX6O43752 255 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 USP14P54578 494 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 FKBP1BP68106 108 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 PKN1Q16512 942 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 CST9Q5W186 159 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 ERO1BQ86YB8 467 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 C2orf69Q8N8R5 385 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 MYH6P13533 1939 aa27.84■■■□□ 2.05
ATPAF1-213ENST00000574428 VPS37CA5D8V6 355 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 SPDYE5A6NIY4 337 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 SMARCA1P28370 1054 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 HMGCS2P54868 508 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 IKQ13123 557 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 FOXD4L5Q5VV16 416 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 FOXD4L4Q8WXT5 416 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 LPAR1Q92633 364 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 RIOX1Q9H6W3 641 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 NBR1Q14596 966 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 HOMER1Q86YM7 354 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 ADGRF4Q8IZF3 695 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 WASF1Q92558 559 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 C8orf76Q96K31 380 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 ZDHHC9Q9Y397 364 aa27.83■■■□□ 2.05
ATPAF1-213ENST00000574428 NUCB2P80303 420 aa27.82■■■□□ 2.04
ATPAF1-213ENST00000574428 GUCY1B3Q02153 619 aa27.82■■■□□ 2.04
ATPAF1-213ENST00000574428 PPATQ06203 517 aa27.82■■■□□ 2.04
ATPAF1-213ENST00000574428 OTUD7BQ6GQQ9 843 aa27.82■■■□□ 2.04
ATPAF1-213ENST00000574428 OPTNQ96CV9 577 aa27.82■■■□□ 2.04
ATPAF1-213ENST00000574428 VCAM1P19320 739 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 RRP36Q96EU6 259 aaKnown RBP27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 PIGSQ96S52 555 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 JMJD4Q9H9V9 463 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 MTMR6Q9Y217 621 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 TRPM7Q96QT4 1865 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 C19orf81C9J6K1 198 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 H3BQV1 296 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 WDR46O15213 610 aaKnown RBP27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 IFFO2Q5TF58 517 aa27.81■■■□□ 2.04
ATPAF1-213ENST00000574428 RBM27Q9P2N5 1060 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms