RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CTDP1Q9Y5B0 961 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC1-206ENST00000573989 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 IFIT3O14879 490 aaKnown RBP14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 HOXD10P28358 340 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 IKQ13123 557 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 TSGA10IPQ3SY00 556 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 CD99L2Q8TCZ2 262 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 CHURC1Q8WUH1 139 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 DCAF4Q8WV16 495 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 ANKS1AQ92625 1134 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 SLF1Q9BQI6 1058 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 PAGR1Q9BTK6 254 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 MORF4L1Q9UBU8 362 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 RLFQ13129 1914 aa14.98□□□□□ -0.01
TRAPPC1-206ENST00000573989 FMNL1O95466 1100 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 HMGB1P09429 215 aaKnown RBP14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 FDX1P10109 184 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 HSPA4P34932 840 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 STAT2P52630 851 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 FCGRTP55899 365 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 ERVK-9P63128 1117 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 ERVK-24P63145 666 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 CCDC96Q2M329 555 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 RCSD1Q6JBY9 416 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 STOX1Q6ZVD7 989 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 FAM160B2Q86V87 743 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 ENAHQ8N8S7 591 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 PRPF38AQ8NAV1 312 aaKnown RBP14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 PNMA1Q8ND90 353 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 CWC22Q9HCG8 908 aaKnown RBP14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 PPP1R9AQ9ULJ8 1098 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 MTMR7Q9Y216 660 aa14.97□□□□□ -0.01
TRAPPC1-206ENST00000573989 TMEM232C9JQI7 657 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 PSMC4P43686 418 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 PRMT2P55345 433 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 WTAPQ15007 396 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 CYB5R4Q7L1T6 521 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 MB21D2Q8IYB1 491 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 TMTC2Q8N394 836 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 COA7Q96BR5 231 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 TMEM87BQ96K49 555 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 RBPJLQ9UBG7 517 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 TRIM17Q9Y577 477 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 TAF6LQ9Y6J9 622 aa14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 COL11A1P12107 1806 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC1-206ENST00000573989 PRC1O43663 620 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 PLA2G6O60733 806 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 ZBED4O75132 1171 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 PSMA5P28066 241 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 MAPK4P31152 587 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 GPATCH4Q5T3I0 446 aaKnown RBP14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 KCTD1Q719H9 257 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 KIFC2Q96AC6 838 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 ATG4CQ96DT6 458 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 A0A0G2JMZ2 1700 aa14.95□□□□□ -0.02
TRAPPC1-206ENST00000573989 VWA5AO00534 786 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 TNPO2O14787 897 aaKnown RBP14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 PDHBP11177 359 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 PLS1Q14651 629 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 SEC23AQ15436 765 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 COL13A1Q5TAT6 717 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 CHST3Q7LGC8 479 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 OTOP1Q7RTM1 612 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 KCNB2Q92953 911 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 TXNRD2Q9NNW7 524 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 FBXO28Q9NVF7 368 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 ADAMTS5Q9UNA0 930 aa14.94□□□□□ -0.02
TRAPPC1-206ENST00000573989 DOCK3Q8IZD9 2030 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 WDR19Q8NEZ3 1342 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 CCDC69A6NI79 296 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 SLC25A27O95847 323 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 SNHG28P0DPA3 235 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 COPB2P35606 906 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 ANTXR2P58335 489 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 ASPRV1Q53RT3 343 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 NFXL1Q6ZNB6 911 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 DHX32Q7L7V1 743 aaKnown RBP14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 CATIPQ7Z7H3 387 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 TRIM47Q96LD4 638 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 SPATC1LQ9H0A9 340 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 BTBD7Q9P203 1132 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 IVNS1ABPQ9Y6Y0 642 aa14.93□□□□□ -0.02
TRAPPC1-206ENST00000573989 CNMDO75829 334 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 ECM2O94769 699 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 PARP1P09874 1014 aaKnown RBP14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 LIFRP42702 1097 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 FGD1P98174 961 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 ZNF543Q08ER8 600 aa14.92□□□□□ -0.02
TRAPPC1-206ENST00000573989 Q3C1V9 767 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms