RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 VCAM1P19320 739 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 CHMLP26374 656 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 GCLCP48506 637 aaPredicted RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 LACTBP83111 547 aaPredicted RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 TFAP4Q01664 338 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L24Q0WX57 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 IMMTQ16891 758 aaKnown RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 FAM47AQ5JRC9 791 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 CASC1Q6TDU7 716 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 C17orf99Q6UX52 265 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 MFSD6Q6ZSS7 791 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 SKAP1Q86WV1 359 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 SPICE1Q8N0Z3 855 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 ANKRD13CQ8N6S4 541 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 C12orf42Q96LP6 360 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 PAGR1Q9BTK6 254 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 TANGO6Q9C0B7 1094 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 RPAP3Q9H6T3 665 aaPredicted RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 CWC22Q9HCG8 908 aaKnown RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 CLIP2Q9UDT6 1046 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 CTNNA3Q9UI47 895 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 TMX2Q9Y320 296 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 ZMYM6O95789 1325 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 RAD50Q92878 1312 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 ZSWIM8A7E2V4 1837 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 GREB1LQ9C091 1923 aaPredicted RBP9.21□□□□□ -0.94
SMG6-211ENST00000572369 A0A1W2PRG0 241 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 FOXP2O15409 715 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 HOXD10P28358 340 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 HOXA7P31268 230 aaPredicted RBP9.2□□□□□ -0.94
SMG6-211ENST00000572369 PSMC4P43686 418 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 PRMT2P55345 433 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 FCGRTP55899 365 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 HERVK_113P62684 666 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 KIAA1211Q6ZU35 1233 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 USP38Q8NB14 1042 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 LPAR1Q92633 364 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 DSCC1Q9BVC3 393 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 SEMA6BQ9H3T3 888 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 RNF41Q9H4P4 317 aaPredicted RBP9.2□□□□□ -0.94
SMG6-211ENST00000572369 VCPKMTQ9H867 229 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 INCENPQ9NQS7 918 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 ANAPC4Q9UJX5 808 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 ADGRA2Q96PE1 1338 aa9.2□□□□□ -0.94
SMG6-211ENST00000572369 TTLL1O95922 423 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 GNRH1P01148 92 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 BCRP11274 1271 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 FAM110CQ1W6H9 321 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 BMP2KLQ5H9B9 411 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 AKNAD1Q5T1N1 836 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 CATSPERGQ6ZRH7 1159 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
SMG6-211ENST00000572369 ATXN2LQ8WWM7 1075 aaKnown RBP9.19□□□□□ -0.94
SMG6-211ENST00000572369 COA7Q96BR5 231 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 CEP95Q96GE4 821 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 ARHGAP39Q9C0H5 1083 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 NYAP2Q9P242 653 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 STX8Q9UNK0 236 aa9.19□□□□□ -0.94
SMG6-211ENST00000572369 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMG6-211ENST00000572369 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
SMG6-211ENST00000572369 TNPO2O14787 897 aaKnown RBP9.18□□□□□ -0.94
SMG6-211ENST00000572369 WDR46O15213 610 aaKnown RBP9.18□□□□□ -0.94
SMG6-211ENST00000572369 ORC4O43929 436 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 FLOT1O75955 427 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 SGPL1O95470 568 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 PCP11498 1178 aaKnown RBP9.18□□□□□ -0.94
SMG6-211ENST00000572369 PLS1Q14651 629 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 COG2Q14746 738 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 TMEM31Q5JXX7 168 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 WDR78Q5VTH9 848 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 MYPNQ86TC9 1320 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 SIAH1Q8IUQ4 282 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 LRRC47Q8N1G4 583 aaKnown RBP9.18□□□□□ -0.94
SMG6-211ENST00000572369 GPRC5AQ8NFJ5 357 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 RAET1EQ8TD07 263 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 STAG1Q8WVM7 1258 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 ESR2Q92731 530 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 ASB2Q96Q27 587 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMG6-211ENST00000572369 MTMR4Q9NYA4 1195 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 HOXC10Q9NYD6 342 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 MTMR7Q9Y216 660 aa9.18□□□□□ -0.94
SMG6-211ENST00000572369 COL11A1P12107 1806 aaPredicted RBP9.17□□□□□ -0.94
SMG6-211ENST00000572369 F5H6K3 240 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 SGSM2O43147 1006 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 GRK4P32298 578 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 ERVK-24P63145 666 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 CCNA1P78396 465 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 KLRC3Q07444 240 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 TRDNQ13061 729 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 IKQ13123 557 aaPredicted RBP9.17□□□□□ -0.94
SMG6-211ENST00000572369 KIAA1755Q5JYT7 1200 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 FAM83BQ5T0W9 1011 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 TBC1D10CQ8IV04 446 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 CHMP4CQ96CF2 233 aa9.17□□□□□ -0.94
SMG6-211ENST00000572369 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms