RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-209ENST00000571558 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 SMAD3P84022 425 aaKnown RBP16.28■□□□□ 0.2
RPAIN-209ENST00000571558 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 MAFAQ8NHW3 353 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-209ENST00000571558 C12orf42Q96LP6 360 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 FAM161BQ96MY7 647 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 PAGR1Q9BTK6 254 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.2
RPAIN-209ENST00000571558 USP17L15C9J2P7 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L11C9JVI0 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L18D6R9N7 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L22D6RA61 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L19D6RCP7 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L20D6RJB6 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 PTPREP23469 700 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L24Q0WX57 530 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 LBX2Q6XYB7 198 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 DCP1AQ9NPI6 582 aaPredicted RBP16.27■□□□□ 0.19
RPAIN-209ENST00000571558 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.19
RPAIN-209ENST00000571558 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 TMEM265A0A087WTH1 108 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 SLC27A2O14975 620 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 PEX10O60683 326 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 APPP05067 770 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 ATP2B2Q01814 1243 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 TGFBRAP1Q8WUH2 860 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 KIF2CQ99661 725 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 NACAP1Q9BZK3 213 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 CTNNA3Q9UI47 895 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 TAF6LQ9Y6J9 622 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 FLT1P17948 1338 aa16.26■□□□□ 0.19
RPAIN-209ENST00000571558 FOCADQ5VW36 1801 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 TTC28Q96AY4 2481 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 HLA-DOAP06340 250 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 CYP21A2P08686 494 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 USP14P54578 494 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 RTP1P59025 263 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 JAG1P78504 1218 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 NAPBQ9H115 298 aa16.25■□□□□ 0.19
RPAIN-209ENST00000571558 IGHA2P01877 340 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 CNGA1P29973 690 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 USP5P45974 858 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 TDO2P48775 406 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 ATN1P54259 1190 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-209ENST00000571558 ANAPC15P60006 121 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 GRB14Q14449 540 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 SHHQ15465 462 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 MAPKAPK5Q8IW41 473 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 FLRT1Q9NZU1 646 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 PRUNE2Q8WUY3 3088 aa16.24■□□□□ 0.19
RPAIN-209ENST00000571558 STRNO43815 780 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 MCCP23508 829 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 SNX17Q15036 470 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 SLC39A5Q6ZMH5 540 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 KIAA1683Q9H0B3 1180 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 ANAPC4Q9UJX5 808 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L12C9JPN9 530 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 USP17L21D6R901 530 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 CNMDO75829 334 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 GDF11O95390 407 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 CYBAP13498 195 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
RPAIN-209ENST00000571558 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 OLFML2BQ68BL8 750 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 FEZ1Q99689 392 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 ARPP21Q9UBL0 812 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-209ENST00000571558 ATP11BQ9Y2G3 1177 aa16.22■□□□□ 0.19
RPAIN-209ENST00000571558 NAV1Q8NEY1 1877 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 CYP2D7A0A087X1C5 515 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 SMIM22K7EJ46 135 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 ZNF213O14771 459 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 EVX2Q03828 476 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 WDR78Q5VTH9 848 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 TATDN1Q6P1N9 297 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 STOX1Q6ZVD7 989 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 TBC1D10CQ8IV04 446 aa16.21■□□□□ 0.19
RPAIN-209ENST00000571558 DDRGK1Q96HY6 314 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms