RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CNPY2Q9Y2B0 182 aa13.77□□□□□ -0.21
CHMP6-202ENST00000571457 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
CHMP6-202ENST00000571457 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 MOXD2PA6NHM9 499 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 ACLYP53396 1101 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 GABPAQ06546 454 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 TMEM179Q6ZVK1 233 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 ATG4CQ96DT6 458 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 UHRF1Q96T88 793 aaPredicted RBP13.76□□□□□ -0.21
CHMP6-202ENST00000571457 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.213e-7■■■■□ 20.1
CHMP6-202ENST00000571457 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
CHMP6-202ENST00000571457 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
CHMP6-202ENST00000571457 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
CHMP6-202ENST00000571457 COPB2P35606 906 aa13.75□□□□□ -0.21
CHMP6-202ENST00000571457 POLA2Q14181 598 aa13.75□□□□□ -0.21
CHMP6-202ENST00000571457 CRNKL1Q9BZJ0 848 aaKnown RBP13.75□□□□□ -0.21
CHMP6-202ENST00000571457 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
CHMP6-202ENST00000571457 MCM9Q9NXL9 1143 aa13.75□□□□□ -0.21
CHMP6-202ENST00000571457 DBNLQ9UJU6 430 aaKnown RBP13.75□□□□□ -0.21
CHMP6-202ENST00000571457 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
CHMP6-202ENST00000571457 ELP1O95163 1332 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
CHMP6-202ENST00000571457 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 PGK2P07205 417 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 RAB30Q15771 203 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 ZNF792Q3KQV3 632 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 PSRC1Q6PGN9 363 aaPredicted RBP13.74□□□□□ -0.21
CHMP6-202ENST00000571457 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
CHMP6-202ENST00000571457 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
CHMP6-202ENST00000571457 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 GLT1D1Q96MS3 346 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 RIOK1Q9BRS2 568 aaKnown RBP13.74□□□□□ -0.21
CHMP6-202ENST00000571457 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 PRDM12Q9H4Q4 367 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 RAPGEFL1Q9UHV5 662 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
CHMP6-202ENST00000571457 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 ZNF865P0CJ78 1059 aaPredicted RBP13.73□□□□□ -0.21
CHMP6-202ENST00000571457 TAL1P17542 331 aaPredicted RBP13.73□□□□□ -0.21
CHMP6-202ENST00000571457 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 TMEM240Q5SV17 173 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 RIOX2Q8IUF8 465 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 C1QTNF1Q9BXJ1 281 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
CHMP6-202ENST00000571457 VCPKMTQ9H867 229 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
CHMP6-202ENST00000571457 SYNRGQ9UMZ2 1314 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 TRIM27P14373 513 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 IGFBP4P22692 258 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 PBX2P40425 430 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 STAT3P40763 770 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 ICA1Q05084 483 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 KCNA10Q16322 511 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 KIAA1755Q5JYT7 1200 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 PCSK9Q8NBP7 692 aaKnown RBP13.72□□□□□ -0.21
CHMP6-202ENST00000571457 KLHDC9Q8NEP7 349 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 CCDC8Q9H0W5 538 aaPredicted RBP13.72□□□□□ -0.21
CHMP6-202ENST00000571457 SPC25Q9HBM1 224 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 PLXNA1Q9UIW2 1896 aa13.72□□□□□ -0.21
CHMP6-202ENST00000571457 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 DUSP11O75319 330 aaKnown RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 CSF2RAP15509 400 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 TTF1Q15361 905 aaPredicted RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 AAK1Q2M2I8 961 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 VTI1AQ96AJ9 217 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 LENG1Q96BZ8 264 aaPredicted RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 CCDC17Q96LX7 622 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 ANTXR1Q9H6X2 564 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 NOP58Q9Y2X3 529 aaKnown RBP13.71□□□□□ -0.21
CHMP6-202ENST00000571457 TRANK1O15050 2925 aa13.71□□□□□ -0.21
CHMP6-202ENST00000571457 NAV1Q8NEY1 1877 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 GRXCR1A8MXD5 290 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 APBB1O00213 710 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 VWA5AO00534 786 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
CHMP6-202ENST00000571457 CDK7P50613 346 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 SLC9C2Q5TAH2 1124 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 CCSAPQ6IQ19 270 aaPredicted RBP13.7□□□□□ -0.22
CHMP6-202ENST00000571457 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
CHMP6-202ENST00000571457 DDX11Q96FC9 970 aa13.7□□□□□ -0.22
CHMP6-202ENST00000571457 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
CHMP6-202ENST00000571457 A0A0U1RQG5 324 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms