RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 DDRGK1Q96HY6 314 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 DCTPP1Q9H773 170 aa21.08■□□□□ 0.97
CIITA-206ENST00000571190 ARPP21Q9UBL0 812 aaPredicted RBP21.08■□□□□ 0.97
CIITA-206ENST00000571190 VWA5AO00534 786 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 SLC25A27O95847 323 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 FCER1AP12319 257 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 RASA1P20936 1047 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 RTP1P59025 263 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 FAM83BQ5T0W9 1011 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 RIOX2Q8IUF8 465 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 ZNF214Q9UL59 606 aaPredicted RBP21.07■□□□□ 0.96
CIITA-206ENST00000571190 PPP1R9AQ9ULJ8 1098 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
CIITA-206ENST00000571190 RLFQ13129 1914 aa21.06■□□□□ 0.96
CIITA-206ENST00000571190 DEFB123Q8N688 67 aa21.06■□□□□ 0.96
CIITA-206ENST00000571190 ARRDC4Q8NCT1 418 aa21.06■□□□□ 0.96
CIITA-206ENST00000571190 EPB41L4AQ9HCS5 686 aaPredicted RBP21.06■□□□□ 0.96
CIITA-206ENST00000571190 SLC5A4Q9NY91 659 aa21.06■□□□□ 0.96
CIITA-206ENST00000571190 PGK2P07205 417 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 STAT3P40763 770 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 GIMAP6Q6P9H5 292 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 SLC39A5Q6ZMH5 540 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 STK11IPQ8N1F8 1099 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 APPBP2Q92624 585 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 NUP88Q99567 741 aaPredicted RBP21.05■□□□□ 0.96
CIITA-206ENST00000571190 GOPCQ9HD26 462 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 ZNF236Q9UL36 1845 aa21.05■□□□□ 0.96
CIITA-206ENST00000571190 LRRC41Q15345 812 aa21.04■□□□□ 0.96
CIITA-206ENST00000571190 ZNF792Q3KQV3 632 aa21.04■□□□□ 0.96
CIITA-206ENST00000571190 FAM47AQ5JRC9 791 aa21.04■□□□□ 0.96
CIITA-206ENST00000571190 MMP19Q99542 508 aa21.04■□□□□ 0.96
CIITA-206ENST00000571190 MTMR10Q9NXD2 777 aa21.04■□□□□ 0.96
CIITA-206ENST00000571190 NYAP2Q9P242 653 aa21.04■□□□□ 0.96
CIITA-206ENST00000571190 ROBO3Q96MS0 1386 aa21.03■□□□□ 0.96
CIITA-206ENST00000571190 IGKV6D-41A0A0C4DH26 115 aa21.03■□□□□ 0.96
CIITA-206ENST00000571190 RNF113AO15541 343 aaKnown RBP21.03■□□□□ 0.96
CIITA-206ENST00000571190 TAL1P17542 331 aaPredicted RBP21.03■□□□□ 0.96
CIITA-206ENST00000571190 SNX17Q15036 470 aa21.03■□□□□ 0.96
CIITA-206ENST00000571190 MINDY4BA8MYZ0 360 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 KBTBD13C9JR72 458 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 F5H6K3 240 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 M0R2C6 588 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 GPAA1O43292 621 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 RAD21O60216 631 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 ADCYAP1R1P41586 468 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 KLRC3Q07444 240 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 TINF2Q9BSI4 451 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 NRBP1Q9UHY1 535 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 ATP11BQ9Y2G3 1177 aa21.02■□□□□ 0.96
CIITA-206ENST00000571190 DIS3Q9Y2L1 958 aaKnown RBP21.02■□□□□ 0.96
CIITA-206ENST00000571190 NDUFB10O96000 172 aa21.01■□□□□ 0.95
CIITA-206ENST00000571190 ZNF865P0CJ78 1059 aaPredicted RBP21.01■□□□□ 0.95
CIITA-206ENST00000571190 SLC17A8Q8NDX2 589 aa21.01■□□□□ 0.95
CIITA-206ENST00000571190 LBHD1Q9BQE6 289 aaPredicted RBP21.01■□□□□ 0.95
CIITA-206ENST00000571190 MKNK2Q9HBH9 465 aa21.01■□□□□ 0.95
CIITA-206ENST00000571190 RIPK3Q9Y572 518 aa21.01■□□□□ 0.95
CIITA-206ENST00000571190 PRDM1O75626 825 aa21■□□□□ 0.95
CIITA-206ENST00000571190 MYCNP04198 464 aaPredicted RBP21■□□□□ 0.95
CIITA-206ENST00000571190 KCTD2Q14681 263 aa21■□□□□ 0.95
CIITA-206ENST00000571190 TRIM60Q495X7 471 aa21■□□□□ 0.95
CIITA-206ENST00000571190 FERMT2Q96AC1 680 aa21■□□□□ 0.95
CIITA-206ENST00000571190 SLF1Q9BQI6 1058 aa21■□□□□ 0.95
CIITA-206ENST00000571190 CLIP2Q9UDT6 1046 aa21■□□□□ 0.95
CIITA-206ENST00000571190 PCDHB15Q9Y5E8 787 aa21■□□□□ 0.95
CIITA-206ENST00000571190 ZFYP08048 801 aaPredicted RBP20.99■□□□□ 0.95
CIITA-206ENST00000571190 C1orf53Q5VUE5 145 aa20.99■□□□□ 0.95
CIITA-206ENST00000571190 PI4K2BQ8TCG2 481 aa20.99■□□□□ 0.95
CIITA-206ENST00000571190 OTUD7AQ8TE49 926 aaPredicted RBP20.99■□□□□ 0.95
CIITA-206ENST00000571190 GPATCH3Q96I76 525 aa20.99■□□□□ 0.95
CIITA-206ENST00000571190 SEC62Q99442 399 aaKnown RBP20.99■□□□□ 0.95
CIITA-206ENST00000571190 PATL2C9JE40 543 aaKnown RBP20.98■□□□□ 0.95
CIITA-206ENST00000571190 POTEB2H3BUK9 544 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 PGK1P00558 417 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 COPB2P35606 906 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 SH3RF1Q7Z6J0 888 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 MKL1Q969V6 931 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 TEX13BQ9BXU2 312 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 XPNPEP3Q9NQH7 507 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 PDLIM7Q9NR12 457 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 MTMR4Q9NYA4 1195 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 PHF24Q9UPV7 400 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 STXBP5LQ9Y2K9 1186 aa20.98■□□□□ 0.95
CIITA-206ENST00000571190 DNAJC25-GNG10A0A024R161 153 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 TRIM43BA6NCK2 446 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 ATP2A1O14983 1001 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 RARBP10826 455 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 GNAT2P19087 354 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 SNRNP48Q6IEG0 339 aaKnown RBP20.97■□□□□ 0.95
CIITA-206ENST00000571190 IFNL3Q8IZI9 196 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 PRPF38AQ8NAV1 312 aaKnown RBP20.97■□□□□ 0.95
CIITA-206ENST00000571190 TRIM43Q96BQ3 446 aaPredicted RBP20.97■□□□□ 0.95
CIITA-206ENST00000571190 LENG1Q96BZ8 264 aaPredicted RBP20.97■□□□□ 0.95
CIITA-206ENST00000571190 CEP95Q96GE4 821 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 PRKAG2Q9UGJ0 569 aa20.97■□□□□ 0.95
CIITA-206ENST00000571190 BAZ2AQ9UIF9 1905 aaKnown RBP20.96■□□□□ 0.95
CIITA-206ENST00000571190 SNAI1O95863 264 aaPredicted RBP20.96■□□□□ 0.95
CIITA-206ENST00000571190 TDO2P48775 406 aa20.96■□□□□ 0.95
CIITA-206ENST00000571190 TLE2Q04725 743 aa20.96■□□□□ 0.95
CIITA-206ENST00000571190 SHHQ15465 462 aa20.96■□□□□ 0.95
CIITA-206ENST00000571190 C9orf50Q5SZB4 431 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms