RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 CNGA1P29973 690 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 TDO2P48775 406 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 RTP1P59025 263 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 TTC6Q86TZ1 520 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 FOXP4Q8IVH2 680 aaPredicted RBP25.55■■□□□ 1.68
UBFD1-210ENST00000571064 DDRGK1Q96HY6 314 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 TRIM34Q9BYJ4 488 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 NACAP1Q9BZK3 213 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 PRKAG2Q9UGJ0 569 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 HLA-DOAP06340 250 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 GABPAQ06546 454 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 SHHQ15465 462 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 WDR78Q5VTH9 848 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 USP17L2Q6R6M4 530 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 MAFAQ8NHW3 353 aaPredicted RBP25.54■■□□□ 1.68
UBFD1-210ENST00000571064 LPAR1Q92633 364 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 DYNLL2Q96FJ2 89 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 DSCC1Q9BVC3 393 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 NAPBQ9H115 298 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 EHD4Q9H223 541 aa25.54■■□□□ 1.68
UBFD1-210ENST00000571064 ARPP21Q9UBL0 812 aaPredicted RBP25.54■■□□□ 1.68
UBFD1-210ENST00000571064 ZYXQ15942 572 aaKnown RBP25.53■■□□□ 1.68
UBFD1-210ENST00000571064 SEMA6BQ9H3T3 888 aa25.53■■□□□ 1.68
UBFD1-210ENST00000571064 GINM1Q9NU53 330 aa25.53■■□□□ 1.68
UBFD1-210ENST00000571064 RABGAP1Q9Y3P9 1069 aa25.53■■□□□ 1.68
UBFD1-210ENST00000571064 MINDY4BA8MYZ0 360 aa25.52■■□□□ 1.68
UBFD1-210ENST00000571064 C9orf50Q5SZB4 431 aa25.52■■□□□ 1.68
UBFD1-210ENST00000571064 LSG1Q9H089 658 aaKnown RBP25.52■■□□□ 1.68
UBFD1-210ENST00000571064 SERPINB13Q9UIV8 391 aa25.52■■□□□ 1.68
UBFD1-210ENST00000571064 ATP11BQ9Y2G3 1177 aa25.52■■□□□ 1.68
UBFD1-210ENST00000571064 LTBP2Q14767 1821 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 SLC15A5A6NIM6 579 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 DNM1LO00429 736 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 PTPREP23469 700 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 CYP2C19P33261 490 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 CCNA1P78396 465 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 ATP2B2Q01814 1243 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 CASC1Q6TDU7 716 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 SLC44A5Q8NCS7 719 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 TRPV1Q8NER1 839 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 NPLOC4Q8TAT6 608 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 ZMYM6O95789 1325 aa25.51■■□□□ 1.67
UBFD1-210ENST00000571064 MSCO60682 206 aa25.5■■□□□ 1.67
UBFD1-210ENST00000571064 GH2P01242 217 aa25.5■■□□□ 1.67
UBFD1-210ENST00000571064 GJC2Q5T442 439 aaPredicted RBP25.5■■□□□ 1.67
UBFD1-210ENST00000571064 MYLIPQ8WY64 445 aa25.5■■□□□ 1.67
UBFD1-210ENST00000571064 PRDM6Q9NQX0 595 aa25.5■■□□□ 1.67
UBFD1-210ENST00000571064 TACC3Q9Y6A5 838 aa25.5■■□□□ 1.67
UBFD1-210ENST00000571064 PRUNE2Q8WUY3 3088 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 ROBO3Q96MS0 1386 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L15C9J2P7 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L13C9JLJ4 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L11C9JVI0 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L18D6R9N7 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L22D6RA61 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L17D6RBQ6 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L19D6RCP7 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L20D6RJB6 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 SHMT1P34896 483 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 PPARAQ07869 468 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 USP17L24Q0WX57 530 aa25.49■■□□□ 1.67
UBFD1-210ENST00000571064 SPTBN5Q9NRC6 3674 aaKnown RBP25.49■■□□□ 1.67
UBFD1-210ENST00000571064 HOXC6P09630 235 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 TATDN1Q6P1N9 297 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 C16orf86Q6ZW13 317 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 AMOTL1Q8IY63 956 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 STK11IPQ8N1F8 1099 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 MAP4K1Q92918 833 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 C12orf42Q96LP6 360 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 FEZ1Q99689 392 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 TTYH1Q9H313 450 aaPredicted RBP25.48■■□□□ 1.67
UBFD1-210ENST00000571064 PRDM5Q9NQX1 630 aaPredicted RBP25.48■■□□□ 1.67
UBFD1-210ENST00000571064 BTBD7Q9P203 1132 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 IVNS1ABPQ9Y6Y0 642 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 LAMA4Q16363 1823 aa25.48■■□□□ 1.67
UBFD1-210ENST00000571064 CDK8P49336 464 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 CTDSPL2Q05D32 466 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 GRB14Q14449 540 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 SLC39A5Q6ZMH5 540 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 CATSPERGQ6ZRH7 1159 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 BADQ92934 168 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 INCENPQ9NQS7 918 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 ANAPC4Q9UJX5 808 aa25.47■■□□□ 1.67
UBFD1-210ENST00000571064 CYBAP13498 195 aa25.46■■□□□ 1.67
UBFD1-210ENST00000571064 HAND2P61296 217 aa25.46■■□□□ 1.67
UBFD1-210ENST00000571064 ANO1Q5XXA6 986 aa25.46■■□□□ 1.67
UBFD1-210ENST00000571064 KIAA1211Q6ZU35 1233 aa25.46■■□□□ 1.67
UBFD1-210ENST00000571064 ANO2Q9NQ90 1003 aa25.46■■□□□ 1.67
UBFD1-210ENST00000571064 RLFQ13129 1914 aa25.45■■□□□ 1.67
UBFD1-210ENST00000571064 CDH23Q9H251 3354 aa25.45■■□□□ 1.66
UBFD1-210ENST00000571064 IGHA2P01877 340 aa25.45■■□□□ 1.66
UBFD1-210ENST00000571064 SWAP70Q9UH65 585 aa25.45■■□□□ 1.66
UBFD1-210ENST00000571064 RBM8AQ9Y5S9 174 aaKnown RBP25.45■■□□□ 1.66
UBFD1-210ENST00000571064 MYH8P13535 1937 aa25.45■■□□□ 1.66
UBFD1-210ENST00000571064 VCAM1P19320 739 aa25.44■■□□□ 1.66
UBFD1-210ENST00000571064 TRIM60Q495X7 471 aa25.44■■□□□ 1.66
UBFD1-210ENST00000571064 TBC1D10CQ8IV04 446 aa25.44■■□□□ 1.66
UBFD1-210ENST00000571064 ARRDC4Q8NCT1 418 aa25.44■■□□□ 1.66
UBFD1-210ENST00000571064 ACER1Q8TDN7 264 aa25.44■■□□□ 1.66
UBFD1-210ENST00000571064 U3KPZ7 1027 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms