RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-203ENST00000570300 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 CALML3P27482 149 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 DCAF15Q66K64 600 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 USP48Q86UV5 1035 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 RTEL1Q9NZ71 1219 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
NPLOC4-203ENST00000570300 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 SCN4AP35499 1836 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 F5H6K3 240 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 UBE2Q2LH0YL09 131 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 PLA2G6O60733 806 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 GDF11O95390 407 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 YY1P25490 414 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 UBE2HP62256 183 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 KLRC3Q07444 240 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 NPY5RQ15761 445 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 GPR162Q16538 588 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 NOSTRINQ8IVI9 506 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 DIS3L2Q8IYB7 885 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 SHISA4Q96DD7 197 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 CHAMP1Q96JM3 812 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 GJB4Q9NTQ9 266 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
NPLOC4-203ENST00000570300 ESYT2A0FGR8 921 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 YEATS4O95619 227 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 CLEC10AQ8IUN9 316 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 CCDC12Q8WUD4 166 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 BRMS1Q9HCU9 246 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 GGA3Q9NZ52 723 aa12.67□□□□□ -0.38
NPLOC4-203ENST00000570300 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 NDUFB10O96000 172 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 KRT2P35908 639 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 SLC1A4P43007 532 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 PPP1R18Q6NYC8 613 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 FAM173BQ6P4H8 233 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 TNFRSF25Q93038 417 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 VPS54Q9P1Q0 977 aa12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 DDX49Q9Y6V7 483 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-203ENST00000570300 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 PNMA6FA0A0J9YX94 578 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 M0R2N6 131 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 STXBP3O00186 592 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 FIBPO43427 364 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 NCLP19338 710 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 TRAPPC10P48553 1259 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 NOL9Q5SY16 702 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 KCNG4Q8TDN1 519 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 JMJD4Q9H9V9 463 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 KCNJ14Q9UNX9 436 aa12.65□□□□□ -0.38
NPLOC4-203ENST00000570300 DOCK1Q14185 1865 aa12.64□□□□□ -0.39
NPLOC4-203ENST00000570300 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms