RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	FXR1	P51114	621 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	TRIM32	Q13049	653 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784		Q3C1V9	767 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	TMEM179	Q6ZVK1	233 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	LCORL	Q8N3X6	602 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	ACER1	Q8TDN7	264 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	RIOK1	Q9BRS2	568 aa	Known RBP	10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	PORCN	Q9H237	461 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	ZBTB40	Q9NUA8	1239 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	SLC5A4	Q9NY91	659 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	HOXC10	Q9NYD6	342 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	RBM27	Q9P2N5	1060 aa	Known RBP	10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	GJD2	Q9UKL4	321 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	SLC4A4	Q9Y6R1	1079 aa		10.26	□□□□□ -0.77
SCAPER-223	ENST00000569784	MYH7	P12883	1935 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	DDX60L	Q5H9U9	1706 aa	Known RBP	10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	GRXCR2	A6NFK2	248 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	FLOT1	O75955	427 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	ATP5J	P18859	108 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	SHMT1	P34896	483 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	ICA1	Q05084	483 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	MAP2K5	Q13163	448 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	COG2	Q14746	738 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	POTEE	Q6S8J3	1075 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	NCAPG2	Q86XI2	1143 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	DIS3L	Q8TF46	1054 aa	Known RBP	10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	C12orf42	Q96LP6	360 aa		10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.25	□□□□□ -0.77
SCAPER-223	ENST00000569784	PLXNB2	O15031	1838 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	SLC15A5	A6NIM6	579 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	APP	P05067	770 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	CYP2D6	P10635	497 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	PTPRE	P23469	700 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	ADD2	P35612	726 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	CACNB2	Q08289	660 aa	Predicted RBP	10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	CCL14	Q16627	93 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	STK11IP	Q8N1F8	1099 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	ZNF454	Q8N9F8	522 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	DYNLL2	Q96FJ2	89 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	CCDC17	Q96LX7	622 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	HAUS7	Q99871	368 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	MKNK2	Q9HBH9	465 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	GOPC	Q9HD26	462 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	PRKAG2	Q9UGJ0	569 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	STAP2	Q9UGK3	403 aa		10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	ISY1	Q9ULR0	285 aa	Known RBP	10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.24	□□□□□ -0.77
SCAPER-223	ENST00000569784	MINDY4B	A8MYZ0	360 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	USP17L12	C9JPN9	530 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	USP17L21	D6R901	530 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	PRKAB2	O43741	272 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	SMARCA5	O60264	1052 aa	Predicted RBP	10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	MSC	O60682	206 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	SYN1	P17600	705 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	CCND3	P30281	292 aa	Predicted RBP	10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	SLC4A3	P48751	1232 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	UBE2Q1	Q7Z7E8	422 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	SPICE1	Q8N0Z3	855 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	SLC44A5	Q8NCS7	719 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	LPAR1	Q92633	364 aa		10.23	□□□□□ -0.77
SCAPER-223	ENST00000569784	STRN	O43815	780 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	AKR1B1	P15121	316 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	TDO2	P48775	406 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	CDK8	P49336	464 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	UBE3C	Q15386	1083 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	MORN1	Q5T089	497 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	MB21D1	Q8N884	522 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	ZNF287	Q9HBT7	754 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	ECHDC1	Q9NTX5	307 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	BTBD7	Q9P203	1132 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	OGDHL	Q9ULD0	1010 aa		10.22	□□□□□ -0.77
SCAPER-223	ENST00000569784	CYP2D7	A0A087X1C5	515 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	TCRBV5S4A2T	A0A5A2	114 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	KBTBD13	C9JR72	458 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	ERC2	O15083	957 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	WDR46	O15213	610 aa	Known RBP	10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	CNMD	O75829	334 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	FCER1A	P12319	257 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	ERCC3	P19447	782 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	GUCY1A2	P33402	732 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	GABPA	Q06546	454 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	C12orf60	Q5U649	245 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	SIRT2	Q8IXJ6	389 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	ADAM33	Q9BZ11	813 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	UBE2O	Q9C0C9	1292 aa	Known RBP	10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	SPATC1L	Q9H0A9	340 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	MROH8	Q9H579	483 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	VCPKMT	Q9H867	229 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	KANSL2	Q9H9L4	492 aa		10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784	DDX20	Q9UHI6	824 aa	Known RBP	10.21	□□□□□ -0.77
SCAPER-223	ENST00000569784		A0A1W2PPC1	479 aa		10.2	□□□□□ -0.78
SCAPER-223	ENST00000569784		A0A1W2PRG0	241 aa		10.2	□□□□□ -0.78
SCAPER-223	ENST00000569784	SLC25A27	O95847	323 aa		10.2	□□□□□ -0.78
SCAPER-223	ENST00000569784	ZFY	P08048	801 aa	Predicted RBP	10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms