RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CCL15-CCL14A0A0B4J2E2 113 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L15C9J2P7 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L13C9JLJ4 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L11C9JVI0 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L18D6R9N7 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L22D6RA61 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L17D6RBQ6 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L19D6RCP7 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L20D6RJB6 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 FDX1P10109 184 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 VCAM1P19320 739 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 USP17L24Q0WX57 530 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 GRM4Q14833 912 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 CCL15Q16663 113 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 PAXIP1Q6ZW49 1069 aaPredicted RBP27.36■■□□□ 1.97
RAB40C-212ENST00000569575 FAM160B2Q86V87 743 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 FANCBQ8NB91 859 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 CHURC1Q8WUH1 139 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 SNX21Q969T3 373 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 BRPF3Q9ULD4 1205 aa27.36■■□□□ 1.97
RAB40C-212ENST00000569575 PDIA3P30101 505 aaKnown RBP27.35■■□□□ 1.97
RAB40C-212ENST00000569575 TM4SF4P48230 202 aa27.35■■□□□ 1.97
RAB40C-212ENST00000569575 ZNF543Q08ER8 600 aa27.35■■□□□ 1.97
RAB40C-212ENST00000569575 APOBRQ0VD83 1088 aa27.35■■□□□ 1.97
RAB40C-212ENST00000569575 SENP2Q9HC62 589 aa27.35■■□□□ 1.97
RAB40C-212ENST00000569575 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.35■■□□□ 1.97
RAB40C-212ENST00000569575 FEM1BQ9UK73 627 aa27.35■■□□□ 1.97
RAB40C-212ENST00000569575 PNMA3Q9UL41 463 aa27.35■■□□□ 1.97
RAB40C-212ENST00000569575 PALM3A6NDB9 673 aaPredicted RBP27.34■■□□□ 1.97
RAB40C-212ENST00000569575 MOGSQ13724 837 aa27.34■■□□□ 1.97
RAB40C-212ENST00000569575 CYP4F22Q6NT55 531 aa27.34■■□□□ 1.97
RAB40C-212ENST00000569575 BTNL9Q6UXG8 535 aa27.34■■□□□ 1.97
RAB40C-212ENST00000569575 HOXC10Q9NYD6 342 aa27.34■■□□□ 1.97
RAB40C-212ENST00000569575 WDR33Q9C0J8 1336 aaKnown RBP27.34■■□□□ 1.97
RAB40C-212ENST00000569575 RAD21O60216 631 aa27.33■■□□□ 1.97
RAB40C-212ENST00000569575 ALDH1A1P00352 501 aa27.33■■□□□ 1.97
RAB40C-212ENST00000569575 METAP2P50579 478 aaKnown RBP eCLIP27.33■■□□□ 1.97
RAB40C-212ENST00000569575 ZYXQ15942 572 aaKnown RBP27.33■■□□□ 1.97
RAB40C-212ENST00000569575 GADL1Q6ZQY3 521 aa27.33■■□□□ 1.97
RAB40C-212ENST00000569575 CATSPERGQ6ZRH7 1159 aa27.33■■□□□ 1.97
RAB40C-212ENST00000569575 GTF3C2Q8WUA4 911 aaPredicted RBP27.33■■□□□ 1.97
RAB40C-212ENST00000569575 NUP133Q8WUM0 1156 aa27.33■■□□□ 1.97
RAB40C-212ENST00000569575 SLKQ9H2G2 1235 aaPredicted RBP27.33■■□□□ 1.97
RAB40C-212ENST00000569575 GOLGA8BA8MQT2 603 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 PFKFB2O60825 505 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 OSBPP22059 807 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 STAT2P52630 851 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 CPLX2Q6PUV4 134 aaKnown RBP27.32■■□□□ 1.96
RAB40C-212ENST00000569575 SPICE1Q8N0Z3 855 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 BRI3BPQ8WY22 251 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 RPAP3Q9H6T3 665 aaPredicted RBP27.32■■□□□ 1.96
RAB40C-212ENST00000569575 PNMA2Q9UL42 364 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 TPCN1Q9ULQ1 816 aa27.32■■□□□ 1.96
RAB40C-212ENST00000569575 COG2Q14746 738 aa27.31■■□□□ 1.96
RAB40C-212ENST00000569575 RTN1Q16799 776 aa27.31■■□□□ 1.96
RAB40C-212ENST00000569575 CCDC96Q2M329 555 aa27.31■■□□□ 1.96
RAB40C-212ENST00000569575 MICU3Q86XE3 530 aa27.31■■□□□ 1.96
RAB40C-212ENST00000569575 PRPF38AQ8NAV1 312 aaKnown RBP27.31■■□□□ 1.96
RAB40C-212ENST00000569575 MAD2L2Q9UI95 211 aa27.31■■□□□ 1.96
RAB40C-212ENST00000569575 GOLGA8AA7E2F4 631 aa27.3■■□□□ 1.96
RAB40C-212ENST00000569575 KIF23Q02241 960 aaPredicted RBP27.3■■□□□ 1.96
RAB40C-212ENST00000569575 KIAA1755Q5JYT7 1200 aa27.3■■□□□ 1.96
RAB40C-212ENST00000569575 FAM83BQ5T0W9 1011 aa27.3■■□□□ 1.96
RAB40C-212ENST00000569575 GPAT2Q6NUI2 795 aa27.3■■□□□ 1.96
RAB40C-212ENST00000569575 NAP1L2Q9ULW6 460 aaPredicted RBP27.3■■□□□ 1.96
RAB40C-212ENST00000569575 HPS5Q9UPZ3 1129 aa27.3■■□□□ 1.96
RAB40C-212ENST00000569575 KLRF2D3W0D1 207 aa27.29■■□□□ 1.96
RAB40C-212ENST00000569575 LBX2Q6XYB7 198 aa27.29■■□□□ 1.96
RAB40C-212ENST00000569575 TANGO6Q9C0B7 1094 aa27.29■■□□□ 1.96
RAB40C-212ENST00000569575 RBM27Q9P2N5 1060 aaKnown RBP27.29■■□□□ 1.96
RAB40C-212ENST00000569575 TMEM232C9JQI7 657 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 CDKL5O76039 1030 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 VEGFBP49765 207 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 IRX3P78415 501 aaPredicted RBP27.28■■□□□ 1.96
RAB40C-212ENST00000569575 MKRN3Q13064 507 aaKnown RBP27.28■■□□□ 1.96
RAB40C-212ENST00000569575 TRAF1Q13077 416 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 IFNL1Q8IU54 200 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 MB21D1Q8N884 522 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 SLF1Q9BQI6 1058 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 SPZ1Q9BXG8 430 aa27.28■■□□□ 1.96
RAB40C-212ENST00000569575 BTBD19C9JJ37 291 aa27.27■■□□□ 1.96
RAB40C-212ENST00000569575 ME3Q16798 604 aa27.27■■□□□ 1.96
RAB40C-212ENST00000569575 PARK7Q99497 189 aaKnown RBP27.27■■□□□ 1.96
RAB40C-212ENST00000569575 PDHXO00330 501 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 CPLX1O14810 134 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 FLOT1O75955 427 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 DSG3P32926 999 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 TREML2Q5T2D2 321 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 TMTC3Q6ZXV5 915 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 KCTD1Q719H9 257 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 GTF3C6Q969F1 213 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 LLPHQ9BRT6 129 aaKnown RBP27.26■■□□□ 1.95
RAB40C-212ENST00000569575 MYL10Q9BUA6 226 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 RIOX1Q9H6W3 641 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 PPP1R9AQ9ULJ8 1098 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 ADAMTS5Q9UNA0 930 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 MTMR7Q9Y216 660 aa27.26■■□□□ 1.95
RAB40C-212ENST00000569575 GCLCP48506 637 aaPredicted RBP27.25■■□□□ 1.95
RAB40C-212ENST00000569575 IKQ13123 557 aaPredicted RBP27.25■■□□□ 1.95
RAB40C-212ENST00000569575 HSCBQ8IWL3 235 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms