RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 KLRC3Q07444 240 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 ALX1Q15699 326 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 NEDD1Q8NHV4 660 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 COA7Q96BR5 231 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 IL17RBQ9NRM6 502 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 MTMR4Q9NYA4 1195 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 SRRDQ9UH36 339 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 B4E1Z4 1266 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 TTLL1O95922 423 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 NDUFB10O96000 172 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 MCCP23508 829 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 SNAP25P60880 206 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 COG2Q14746 738 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 MTFR1Q15390 333 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 AKNAD1Q5T1N1 836 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 SLFN13Q68D06 897 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 KCTD1Q719H9 257 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 RUFY2Q8WXA3 655 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 PDE4DIPQ5VU43 2346 aa10.67□□□□□ -0.7
GTF3C1-210ENST00000569394 GREB1LQ9C091 1923 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 COL11A1P12107 1806 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 IGKV6D-41A0A0C4DH26 115 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 POTEFA5A3E0 1075 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 WDR46O15213 610 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 ADCY3O60266 1144 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 KDM4AO75164 1064 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 CCDC96Q2M329 555 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 NCAPG2Q86XI2 1143 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 CPXCR1Q8N123 301 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 LPAR1Q92633 364 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 HOXC10Q9NYD6 342 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 ANAPC4Q9UJX5 808 aa10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-210ENST00000569394 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 TMEM232C9JQI7 657 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 GRK4P32298 578 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 TRIM32Q13049 653 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 KIAA1211Q6ZU35 1233 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 CHST3Q7LGC8 479 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 GPR142Q7Z601 462 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 PLEKHH3Q7Z736 793 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 NBPF11Q86T75 865 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 MORF4L1Q9UBU8 362 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 RABGAP1Q9Y3P9 1069 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 TAF6LQ9Y6J9 622 aa10.65□□□□□ -0.7
GTF3C1-210ENST00000569394 SGSM2O43147 1006 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 ORC4O43929 436 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 GNRH1P01148 92 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 SLC16A2P36021 539 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 TMEM132BQ14DG7 1078 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 CCL14Q16627 93 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 CCDC174Q6PII3 467 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 STAG1Q8WVM7 1258 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 SLF1Q9BQI6 1058 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 RNF41Q9H4P4 317 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 RAVER2Q9HCJ3 691 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 ANO2Q9NQ90 1003 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 CTNNA3Q9UI47 895 aa10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 RBM8AQ9Y5S9 174 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-210ENST00000569394 RLFQ13129 1914 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 INHAP05111 366 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 BMP3P12645 472 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 ERCC3P19447 782 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 EN2P19622 333 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 SLC1A4P43007 532 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 CCNA1P78396 465 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 LBX2Q6XYB7 198 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 TICAM2Q86XR7 235 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 ESR2Q92731 530 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 ZNF333Q96JL9 665 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 ESYT1Q9BSJ8 1104 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 SPATC1LQ9H0A9 340 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 UNC93B1Q9H1C4 597 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
GTF3C1-210ENST00000569394 HOMER2Q9NSB8 354 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms