RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
USB1-215ENST00000569252 KIAA1683Q9H0B3 1180 aa18.77■□□□□ 0.6
USB1-215ENST00000569252 PDRG1Q9NUG6 133 aa18.77■□□□□ 0.6
USB1-215ENST00000569252 TMX2Q9Y320 296 aa18.77■□□□□ 0.6
USB1-215ENST00000569252 NEK4P51957 841 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 LACTBP83111 547 aaPredicted RBP18.76■□□□□ 0.59
USB1-215ENST00000569252 EXOSC10Q01780 885 aaKnown RBP18.76■□□□□ 0.59
USB1-215ENST00000569252 PABPC4Q13310 644 aaKnown RBP eCLIP18.76■□□□□ 0.59
USB1-215ENST00000569252 ANKRD1Q15327 319 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 GADL1Q6ZQY3 521 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 Q6ZUG5 572 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
USB1-215ENST00000569252 ACER1Q8TDN7 264 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 ANKS1AQ92625 1134 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
USB1-215ENST00000569252 ISY1Q9ULR0 285 aaKnown RBP18.76■□□□□ 0.59
USB1-215ENST00000569252 CPA1P15085 419 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 LIFRP42702 1097 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 CLEC10AQ8IUN9 316 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 IGDCC4Q8TDY8 1250 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 LPAR1Q92633 364 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 LRRC2Q9BYS8 371 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 UPF3BQ9BZI7 483 aaKnown RBP18.75■□□□□ 0.59
USB1-215ENST00000569252 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
USB1-215ENST00000569252 KCNH4Q9UQ05 1017 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 MTMR7Q9Y216 660 aa18.75■□□□□ 0.59
USB1-215ENST00000569252 DOCK1Q14185 1865 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 A0A0G2JLL6 359 aaPredicted RBP18.74■□□□□ 0.59
USB1-215ENST00000569252 A0A1W2PRG0 241 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 F5H6K3 240 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 TLR2O60603 784 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 HMGCS2P54868 508 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 ANTXR2P58335 489 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 KLRC3Q07444 240 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 RABEP1Q15276 862 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 PRRT2Q7Z6L0 340 aaPredicted RBP18.74■□□□□ 0.59
USB1-215ENST00000569252 SIAH1Q8IUQ4 282 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
USB1-215ENST00000569252 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 VCPKMTQ9H867 229 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
USB1-215ENST00000569252 SH2B2O14492 632 aaPredicted RBP18.73■□□□□ 0.59
USB1-215ENST00000569252 ST18O60284 1047 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 CALM1P0DP23 149 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 CALM2P0DP24 149 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 CALM3P0DP25 149 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 NOVP48745 357 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 CHRDL2Q6WN34 429 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 PROCA1Q8NCQ7 364 aaPredicted RBP18.73■□□□□ 0.59
USB1-215ENST00000569252 GMCL1P1Q8NEA9 526 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 TCEANC2Q96MN5 208 aa18.73■□□□□ 0.59
USB1-215ENST00000569252 OSBPP22059 807 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 SLC1A4P43007 532 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 SEC23AQ15436 765 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 RCSD1Q6JBY9 416 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 SPICE1Q8N0Z3 855 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
USB1-215ENST00000569252 IKQ13123 557 aaPredicted RBP18.71■□□□□ 0.59
USB1-215ENST00000569252 MOGSQ13724 837 aa18.71■□□□□ 0.59
USB1-215ENST00000569252 FBXL16Q8N461 479 aa18.71■□□□□ 0.59
USB1-215ENST00000569252 NUP133Q8WUM0 1156 aa18.71■□□□□ 0.59
USB1-215ENST00000569252 DCAF4Q8WV16 495 aa18.71■□□□□ 0.59
USB1-215ENST00000569252 BRF1Q92994 677 aa18.71■□□□□ 0.59
USB1-215ENST00000569252 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
USB1-215ENST00000569252 EMILIN3Q9NT22 766 aa18.71■□□□□ 0.59
USB1-215ENST00000569252 USP17L15C9J2P7 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L13C9JLJ4 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L11C9JVI0 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L18D6R9N7 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L22D6RA61 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L17D6RBQ6 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L19D6RCP7 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L20D6RJB6 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 PDHXO00330 501 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 WDR46O15213 610 aaKnown RBP18.7■□□□□ 0.58
USB1-215ENST00000569252 NDUFB10O96000 172 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 CYP2C8P10632 490 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 BMP3P12645 472 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 PSMC4P43686 418 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 USP17L24Q0WX57 530 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 C17orf99Q6UX52 265 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 SGMS1Q86VZ5 419 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
USB1-215ENST00000569252 CHMP4CQ96CF2 233 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 C12orf42Q96LP6 360 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 TANGO6Q9C0B7 1094 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 PNMA3Q9UL41 463 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 ADGRA2Q96PE1 1338 aa18.7■□□□□ 0.58
USB1-215ENST00000569252 KLF18A0A0U1RQI7 1052 aa18.69■□□□□ 0.58
USB1-215ENST00000569252 ZBTB43O43298 467 aa18.69■□□□□ 0.58
USB1-215ENST00000569252 PARP1P09874 1014 aaKnown RBP18.69■□□□□ 0.58
USB1-215ENST00000569252 KIF5BP33176 963 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms