RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 EOMESO95936 686 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 MAP4P27816 1152 aaKnown RBP8.19□□□□□ -1.1
UBR1-208ENST00000569066 ZNF143P52747 638 aaPredicted RBP8.19□□□□□ -1.1
UBR1-208ENST00000569066 NRG1Q02297 640 aaPredicted RBP8.19□□□□□ -1.1
UBR1-208ENST00000569066 TMC3Q7Z5M5 1100 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 SLC26A8Q96RN1 970 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 PRDM14Q9GZV8 571 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 WHRNQ9P202 907 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 CGGBP1Q9UFW8 167 aaPredicted RBP8.19□□□□□ -1.1
UBR1-208ENST00000569066 FBXL21Q9UKT6 434 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 TRAV20A0A0B4J274 112 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 BLACEA4D250 179 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 PRODHO43272 600 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 CAPNS1P04632 268 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 LONRF2Q1L5Z9 754 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 NIM1KQ8IY84 436 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 BEND7Q8N7W2 519 aaPredicted RBP8.18□□□□□ -1.1
UBR1-208ENST00000569066 UBR7Q8N806 425 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 OSBP2Q969R2 916 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 DHRS4Q9BTZ2 278 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 DUSP23Q9BVJ7 150 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 MEIS1O00470 390 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 KCNH1O95259 989 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 IBSPP21815 317 aaPredicted RBP8.18□□□□□ -1.1
UBR1-208ENST00000569066 HSP90AA2PQ14568 343 aaPredicted RBP8.18□□□□□ -1.1
UBR1-208ENST00000569066 PRSS53Q2L4Q9 553 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 NBPF9Q3BBW0 867 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 SHISA5Q8N114 240 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 MRGPRX3Q96LB0 322 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 TPX2Q9ULW0 747 aaKnown RBP8.18□□□□□ -1.1
UBR1-208ENST00000569066 AKT3Q9Y243 479 aa8.18□□□□□ -1.1
UBR1-208ENST00000569066 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 PIK3R2O00459 728 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 PPM1BO75688 479 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
UBR1-208ENST00000569066 ANAPC15P60006 121 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 DZIP1LQ8IYY4 767 aaKnown RBP8.17□□□□□ -1.1
UBR1-208ENST00000569066 NINJ1Q92982 152 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 GBP3Q9H0R5 595 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 KCNF1Q9H3M0 494 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 PCDHB12Q9Y5F1 795 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 WIPF1O43516 503 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 MYCLP1P12525 358 aaPredicted RBP8.17□□□□□ -1.1
UBR1-208ENST00000569066 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 TM4SF20Q53R12 229 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 RNF141Q8WVD5 230 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 STAG1Q8WVM7 1258 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 Q96M66 194 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 EMC9Q9Y3B6 208 aa8.17□□□□□ -1.1
UBR1-208ENST00000569066 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 ITGA4P13612 1032 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 NFKBIBQ15653 356 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 NOL9Q5SY16 702 aaKnown RBP8.16□□□□□ -1.1
UBR1-208ENST00000569066 THNSL2Q86YJ6 484 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 JAMLQ86YT9 394 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 FIBCD1Q8N539 461 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 ZDHHC15Q96MV8 337 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 PLAAQ9Y263 795 aa8.16□□□□□ -1.1
UBR1-208ENST00000569066 A0A087X0B3 334 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 C6orf222P0C671 652 aaPredicted RBP8.15□□□□□ -1.1
UBR1-208ENST00000569066 NAT2P11245 290 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 SDSP20132 328 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 EVA1CP58658 441 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 FAM20CQ8IXL6 584 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 ZCRB1Q8TBF4 217 aaKnown RBP8.15□□□□□ -1.1
UBR1-208ENST00000569066 MFSD3Q96ES6 412 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 KLHL42Q9P2K6 505 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 GPR55Q9Y2T6 319 aaPredicted RBP8.15□□□□□ -1.1
UBR1-208ENST00000569066 VAMP4O75379 141 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 FAM87AP0C7U9 286 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.1
UBR1-208ENST00000569066 ARHGEF39Q8N4T4 335 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 FBXL18Q96ME1 805 aa8.15□□□□□ -1.1
UBR1-208ENST00000569066 C9orf172C9J069 976 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 PDE8AO60658 829 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 VIL1P09327 827 aaKnown RBP8.14□□□□□ -1.11
UBR1-208ENST00000569066 ADMP35318 185 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 ETV3P41162 512 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 CHRNA4P43681 627 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 RNF4P78317 190 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 CYP4F3Q08477 520 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 SYNPOQ8N3V7 929 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 ASPNQ9BXN1 380 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 H0Y8X5 98 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 NOP56O00567 594 aaKnown RBP8.14□□□□□ -1.11
UBR1-208ENST00000569066 DLX3O60479 287 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 CBX7O95931 251 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 FGFR1P11362 822 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 MAP7Q14244 749 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 DPY19L1Q2PZI1 675 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 GTF2IRD2BQ6EKJ0 949 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
UBR1-208ENST00000569066 BEND4Q6ZU67 534 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms