RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 KLRC3Q07444 240 aa23.95■■□□□ 1.42
ABCA3-206ENST00000569062 MAP2K5Q13163 448 aa23.95■■□□□ 1.42
ABCA3-206ENST00000569062 MB21D1Q8N884 522 aa23.95■■□□□ 1.42
ABCA3-206ENST00000569062 NEDD1Q8NHV4 660 aa23.95■■□□□ 1.42
ABCA3-206ENST00000569062 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.95■■□□□ 1.42
ABCA3-206ENST00000569062 MTMR4Q9NYA4 1195 aa23.95■■□□□ 1.42
ABCA3-206ENST00000569062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.95■■□□□ 1.42
ABCA3-206ENST00000569062 FGAP02671 866 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 HSPD1P10809 573 aaKnown RBP23.94■■□□□ 1.42
ABCA3-206ENST00000569062 PDE4AP27815 886 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 PLS1Q14651 629 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 ALX1Q15699 326 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 MKL1Q969V6 931 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 APBA2Q99767 749 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 ANAPC4Q9UJX5 808 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 ADAMTS5Q9UNA0 930 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 IVNS1ABPQ9Y6Y0 642 aa23.94■■□□□ 1.42
ABCA3-206ENST00000569062 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 RPTORQ8N122 1335 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 SLC15A5A6NIM6 579 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 NDUFB10O96000 172 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 ZKSCAN1P17029 563 aaPredicted RBP23.93■■□□□ 1.42
ABCA3-206ENST00000569062 ERCC3P19447 782 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 GRB14Q14449 540 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 TMEM132BQ14DG7 1078 aa23.93■■□□□ 1.42
ABCA3-206ENST00000569062 PRPF38BQ5VTL8 546 aaKnown RBP23.93■■□□□ 1.42
ABCA3-206ENST00000569062 HMX1Q9NP08 348 aaPredicted RBP23.93■■□□□ 1.42
ABCA3-206ENST00000569062 ZNF236Q9UL36 1845 aa23.92■■□□□ 1.42
ABCA3-206ENST00000569062 TTLL1O95922 423 aa23.92■■□□□ 1.42
ABCA3-206ENST00000569062 MAP3K21Q5TCX8 1036 aa23.92■■□□□ 1.42
ABCA3-206ENST00000569062 TRMT44Q8IYL2 757 aaKnown RBP23.92■■□□□ 1.42
ABCA3-206ENST00000569062 LRRC47Q8N1G4 583 aaKnown RBP23.92■■□□□ 1.42
ABCA3-206ENST00000569062 PPP1R9AQ9ULJ8 1098 aa23.92■■□□□ 1.42
ABCA3-206ENST00000569062 ZNFX1Q9P2E3 1918 aaKnown RBP23.92■■□□□ 1.42
ABCA3-206ENST00000569062 TFRCP02786 760 aaKnown RBP23.91■■□□□ 1.42
ABCA3-206ENST00000569062 PRKAR2AP13861 404 aaKnown RBP23.91■■□□□ 1.42
ABCA3-206ENST00000569062 CACNB2Q08289 660 aaPredicted RBP23.91■■□□□ 1.42
ABCA3-206ENST00000569062 UBE2Q1Q7Z7E8 422 aa23.91■■□□□ 1.42
ABCA3-206ENST00000569062 NCAPG2Q86XI2 1143 aa23.91■■□□□ 1.42
ABCA3-206ENST00000569062 SHCBP1Q8NEM2 672 aa23.91■■□□□ 1.42
ABCA3-206ENST00000569062 NPLOC4Q8TAT6 608 aa23.91■■□□□ 1.42
ABCA3-206ENST00000569062 FLRT1Q9NZU1 646 aa23.91■■□□□ 1.42
ABCA3-206ENST00000569062 TSPY2A6NKD2 308 aa23.9■■□□□ 1.42
ABCA3-206ENST00000569062 VWA5AO00534 786 aa23.9■■□□□ 1.42
ABCA3-206ENST00000569062 CWC27Q6UX04 472 aaKnown RBP23.9■■□□□ 1.42
ABCA3-206ENST00000569062 CRISPLD2Q9H0B8 497 aa23.9■■□□□ 1.42
ABCA3-206ENST00000569062 IL17RBQ9NRM6 502 aa23.9■■□□□ 1.42
ABCA3-206ENST00000569062 NMT2O60551 498 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 HOXC6P09630 235 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 FGRP09769 529 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 ADORA2AP29274 412 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 REPS2Q8NFH8 660 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 SLF1Q9BQI6 1058 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 MROH8Q9H579 483 aa23.89■■□□□ 1.41
ABCA3-206ENST00000569062 ZMYM6O95789 1325 aa23.88■■□□□ 1.41
ABCA3-206ENST00000569062 STRNO43815 780 aa23.88■■□□□ 1.41
ABCA3-206ENST00000569062 RANBP6O60518 1105 aaKnown RBP23.88■■□□□ 1.41
ABCA3-206ENST00000569062 FARP2O94887 1054 aaPredicted RBP23.88■■□□□ 1.41
ABCA3-206ENST00000569062 HAND2P61296 217 aa23.88■■□□□ 1.41
ABCA3-206ENST00000569062 GMCL1P1Q8NEA9 526 aa23.88■■□□□ 1.41
ABCA3-206ENST00000569062 DIAPH3Q9NSV4 1193 aa23.88■■□□□ 1.41
ABCA3-206ENST00000569062 ZNF214Q9UL59 606 aaPredicted RBP23.88■■□□□ 1.41
ABCA3-206ENST00000569062 SYNPO2Q9UMS6 1093 aa23.88■■□□□ 1.41
ABCA3-206ENST00000569062 ORC4O43929 436 aa23.87■■□□□ 1.41
ABCA3-206ENST00000569062 GSPT1P15170 499 aaKnown RBP23.87■■□□□ 1.41
ABCA3-206ENST00000569062 CCND3P30281 292 aaPredicted RBP23.87■■□□□ 1.41
ABCA3-206ENST00000569062 MFAP1P55081 439 aaKnown RBP23.87■■□□□ 1.41
ABCA3-206ENST00000569062 SLFN13Q68D06 897 aa23.87■■□□□ 1.41
ABCA3-206ENST00000569062 DPP9Q86TI2 863 aa23.87■■□□□ 1.41
ABCA3-206ENST00000569062 STX8Q9UNK0 236 aa23.87■■□□□ 1.41
ABCA3-206ENST00000569062 LAMA4Q16363 1823 aa23.87■■□□□ 1.41
ABCA3-206ENST00000569062 COBLO75128 1261 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 SLC25A27O95847 323 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 STAT3P40763 770 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 RRP12Q5JTH9 1297 aaKnown RBP23.86■■□□□ 1.41
ABCA3-206ENST00000569062 TTC22Q5TAA0 569 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 RIOX2Q8IUF8 465 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 PRPF38AQ8NAV1 312 aaKnown RBP23.86■■□□□ 1.41
ABCA3-206ENST00000569062 CHMP4CQ96CF2 233 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 NBPF3Q9H094 633 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 TOMM22Q9NS69 142 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 FRMPD3Q5JV73 1810 aa23.86■■□□□ 1.41
ABCA3-206ENST00000569062 HIP1O00291 1037 aa23.85■■□□□ 1.41
ABCA3-206ENST00000569062 PLXNA1Q9UIW2 1896 aa23.85■■□□□ 1.41
ABCA3-206ENST00000569062 BMP3P12645 472 aa23.84■■□□□ 1.41
ABCA3-206ENST00000569062 CAPN2P17655 700 aa23.84■■□□□ 1.41
ABCA3-206ENST00000569062 CYP2C19P33261 490 aa23.84■■□□□ 1.41
ABCA3-206ENST00000569062 MFSD14CQ5VZR4 134 aa23.84■■□□□ 1.41
ABCA3-206ENST00000569062 DIS3LQ8TF46 1054 aaKnown RBP23.84■■□□□ 1.41
ABCA3-206ENST00000569062 KIFC2Q96AC6 838 aa23.84■■□□□ 1.41
ABCA3-206ENST00000569062 FEM1BQ9UK73 627 aa23.84■■□□□ 1.41
ABCA3-206ENST00000569062 IGHA2P01877 340 aa23.83■■□□□ 1.41
ABCA3-206ENST00000569062 FCER1AP12319 257 aa23.83■■□□□ 1.41
ABCA3-206ENST00000569062 TBC1D10CQ8IV04 446 aa23.83■■□□□ 1.41
ABCA3-206ENST00000569062 ABRAQ8N0Z2 381 aa23.83■■□□□ 1.41
ABCA3-206ENST00000569062 PAWRQ96IZ0 340 aaKnown RBP23.83■■□□□ 1.41
ABCA3-206ENST00000569062 IL25Q9H293 177 aa23.83■■□□□ 1.41
ABCA3-206ENST00000569062 OGDHLQ9ULD0 1010 aa23.83■■□□□ 1.41
ABCA3-206ENST00000569062 MCCP23508 829 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 NOVP48745 357 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms