RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MMP19Q99542 508 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 TINF2Q9BSI4 451 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 SH2D4AQ9H788 454 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 ARHGEF10LQ9HCE6 1279 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 ADAMTS5Q9UNA0 930 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 PLXNA1Q9UIW2 1896 aa15.12■□□□□ 0.01
SNX29-207ENST00000568949 DCDC2CA8MYV0 355 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 WDR46O15213 610 aaKnown RBP15.11■□□□□ 0.01
SNX29-207ENST00000568949 FAAP100Q0VG06 881 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 TMEM132BQ14DG7 1078 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 TTF1Q15361 905 aaPredicted RBP15.11■□□□□ 0.01
SNX29-207ENST00000568949 ZNF792Q3KQV3 632 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 SIAH1Q8IUQ4 282 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 TMEM57Q8N5G2 664 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 SLC44A5Q8NCS7 719 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 ATXN2LQ8WWM7 1075 aaKnown RBP15.11■□□□□ 0.01
SNX29-207ENST00000568949 TIFAQ96CG3 184 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 VCPKMTQ9H867 229 aa15.11■□□□□ 0.01
SNX29-207ENST00000568949 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 MYH8P13535 1937 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 ADAMTS4O75173 837 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 TIMP1P01033 207 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 ZNF865P0CJ78 1059 aaPredicted RBP15.1■□□□□ 0.01
SNX29-207ENST00000568949 COPB2P35606 906 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 EVX2Q03828 476 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 KCTD2Q14681 263 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 AKNAD1Q5T1N1 836 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 RIOX2Q8IUF8 465 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 SPICE1Q8N0Z3 855 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 NUP133Q8WUM0 1156 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 STARD7Q9NQZ5 370 aa15.1■□□□□ 0.01
SNX29-207ENST00000568949 COL11A1P12107 1806 aaPredicted RBP15.1■□□□□ 0.01
SNX29-207ENST00000568949 MOXD2PA6NHM9 499 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 PGK2P07205 417 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 PDE6AP16499 860 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 TAL1P17542 331 aaPredicted RBP15.09■□□□□ 0.01
SNX29-207ENST00000568949 ACLYP53396 1101 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 ICA1Q05084 483 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 MSL3Q8N5Y2 521 aaKnown RBP15.09■□□□□ 0.01
SNX29-207ENST00000568949 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 CCDC17Q96LX7 622 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 GAS2L1Q99501 681 aaPredicted RBP15.09■□□□□ 0.01
SNX29-207ENST00000568949 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.09■□□□□ 0.016e-10■□□□□ 8.5
SNX29-207ENST00000568949 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
SNX29-207ENST00000568949 TBX21Q9UL17 535 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 CNPY2Q9Y2B0 182 aa15.09■□□□□ 0.01
SNX29-207ENST00000568949 STAT3P40763 770 aa15.08■□□□□ 0
SNX29-207ENST00000568949 PPIGQ13427 754 aaKnown RBP eCLIP15.08■□□□□ 03e-9■■■□□ 18.6
SNX29-207ENST00000568949 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0
SNX29-207ENST00000568949 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0
SNX29-207ENST00000568949 MFSD5Q6N075 450 aa15.08■□□□□ 0
SNX29-207ENST00000568949 C1orf115Q9H7X2 142 aa15.08■□□□□ 0
SNX29-207ENST00000568949 MROH7Q68CQ1 1323 aa15.08■□□□□ 0
SNX29-207ENST00000568949 VWA5AO00534 786 aa15.07■□□□□ 0
SNX29-207ENST00000568949 CYP2D6P10635 497 aa15.07■□□□□ 0
SNX29-207ENST00000568949 AKR1B1P15121 316 aa15.07■□□□□ 0
SNX29-207ENST00000568949 RASIP1Q5U651 963 aa15.07■□□□□ 0
SNX29-207ENST00000568949 CCSAPQ6IQ19 270 aaPredicted RBP15.07■□□□□ 0
SNX29-207ENST00000568949 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
SNX29-207ENST00000568949 AACSQ86V21 672 aa15.07■□□□□ 0
SNX29-207ENST00000568949 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
SNX29-207ENST00000568949 CLEC10AQ8IUN9 316 aa15.07■□□□□ 0
SNX29-207ENST00000568949 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
SNX29-207ENST00000568949 DYNLL2Q96FJ2 89 aa15.07■□□□□ 0
SNX29-207ENST00000568949 ASB2Q96Q27 587 aa15.07■□□□□ 0
SNX29-207ENST00000568949 PBX4Q9BYU1 374 aa15.07■□□□□ 0
SNX29-207ENST00000568949 THEGQ9P2T0 379 aa15.07■□□□□ 0
SNX29-207ENST00000568949 ZNF214Q9UL59 606 aaPredicted RBP15.07■□□□□ 0
SNX29-207ENST00000568949 FAM184BQ9ULE4 1060 aa15.07■□□□□ 0
SNX29-207ENST00000568949 PPP1R9AQ9ULJ8 1098 aa15.07■□□□□ 0
SNX29-207ENST00000568949 ELP1O95163 1332 aa15.07■□□□□ 0
SNX29-207ENST00000568949 SYNRGQ9UMZ2 1314 aa15.07■□□□□ 0
SNX29-207ENST00000568949 TCRBV5S4A2TA0A5A2 114 aa15.06■□□□□ 0
SNX29-207ENST00000568949 CST5P28325 142 aaPredicted RBP15.06■□□□□ 0
SNX29-207ENST00000568949 CDK7P50613 346 aa15.06■□□□□ 0
SNX29-207ENST00000568949 KCNA10Q16322 511 aa15.06■□□□□ 0
SNX29-207ENST00000568949 TMEM240Q5SV17 173 aa15.06■□□□□ 0
SNX29-207ENST00000568949 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
SNX29-207ENST00000568949 LCORLQ8N3X6 602 aa15.06■□□□□ 0
SNX29-207ENST00000568949 LENG1Q96BZ8 264 aaPredicted RBP15.06■□□□□ 0
SNX29-207ENST00000568949 GLT1D1Q96MS3 346 aa15.06■□□□□ 0
SNX29-207ENST00000568949 FBXO28Q9NVF7 368 aa15.06■□□□□ 0
SNX29-207ENST00000568949 SYNGAP1Q96PV0 1343 aa15.06■□□□□ 0
SNX29-207ENST00000568949 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
SNX29-207ENST00000568949 DUSP11O75319 330 aaKnown RBP15.05■□□□□ -0
SNX29-207ENST00000568949 PBX2P40425 430 aa15.05■□□□□ -0
SNX29-207ENST00000568949 MAMDC4Q6UXC1 1216 aa15.05■□□□□ -0
SNX29-207ENST00000568949 CCDC129Q6ZRS4 1044 aa15.05■□□□□ -0
SNX29-207ENST00000568949 TMEM199Q8N511 208 aa15.05■□□□□ -0
SNX29-207ENST00000568949 REPS2Q8NFH8 660 aa15.05■□□□□ -0
SNX29-207ENST00000568949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.05■□□□□ -0
SNX29-207ENST00000568949 PRDM12Q9H4Q4 367 aa15.05■□□□□ -0
SNX29-207ENST00000568949 KANSL2Q9H9L4 492 aa15.05■□□□□ -0
SNX29-207ENST00000568949 ATP8A2Q9NTI2 1148 aa15.05■□□□□ -0
SNX29-207ENST00000568949 SNAI1O95863 264 aaPredicted RBP15.04■□□□□ -0
SNX29-207ENST00000568949 EEF2P13639 858 aaKnown RBP15.04■□□□□ -0
SNX29-207ENST00000568949 CDK8P49336 464 aa15.04■□□□□ -0
SNX29-207ENST00000568949 MRPS5P82675 430 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms