RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 C12orf42Q96LP6 360 aa21.73■■□□□ 1.07
SYNGR3-205ENST00000568896 GDF15Q99988 308 aa21.73■■□□□ 1.07
SYNGR3-205ENST00000568896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
SYNGR3-205ENST00000568896 ALPK3Q96L96 1907 aa21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 CNMDO75829 334 aa21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 CCND3P30281 292 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 USP14P54578 494 aa21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 PLEKHH3Q7Z736 793 aa21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 ZNF444Q8N0Y2 327 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 DSCC1Q9BVC3 393 aa21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 TACC3Q9Y6A5 838 aa21.72■■□□□ 1.07
SYNGR3-205ENST00000568896 KANSL2Q9H9L4 492 aa21.71■■□□□ 1.07
SYNGR3-205ENST00000568896 ARHGEF10LQ9HCE6 1279 aa21.71■■□□□ 1.07
SYNGR3-205ENST00000568896 INCENPQ9NQS7 918 aa21.71■■□□□ 1.07
SYNGR3-205ENST00000568896 PFASO15067 1338 aa21.71■■□□□ 1.07
SYNGR3-205ENST00000568896 USP17L15C9J2P7 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L13C9JLJ4 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L11C9JVI0 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L18D6R9N7 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L22D6RA61 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L17D6RBQ6 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L19D6RCP7 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L20D6RJB6 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 EEF2P13639 858 aaKnown RBP21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 RGS2P41220 211 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 HAND2P61296 217 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 USP17L24Q0WX57 530 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 LHX8Q68G74 356 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 TMX2Q9Y320 296 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 PLIN4Q96Q06 1357 aa21.7■■□□□ 1.06
SYNGR3-205ENST00000568896 IGKV6D-41A0A0C4DH26 115 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 SGSM2O43147 1006 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 FGRP09769 529 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 VCAM1P19320 739 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 BMP8BP34820 402 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 CATSPERGQ6ZRH7 1159 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 TRMT44Q8IYL2 757 aaKnown RBP21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 GTF3C2Q8WUA4 911 aaPredicted RBP21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 SH2D4AQ9H788 454 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 RABGAP1Q9Y3P9 1069 aa21.69■■□□□ 1.06
SYNGR3-205ENST00000568896 ORC4O43929 436 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 TSPY3P0CV98 308 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 TSPY8P0CW00 308 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 MAGEA10P43363 369 aaPredicted RBP21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 TFAP4Q01664 338 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 ATP2B2Q01814 1243 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 FAM47AQ5JRC9 791 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 TBC1D10CQ8IV04 446 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 NEDD1Q8NHV4 660 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 CWC22Q9HCG8 908 aaKnown RBP21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 FLRT1Q9NZU1 646 aa21.68■■□□□ 1.06
SYNGR3-205ENST00000568896 LAMA4Q16363 1823 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 COL6A1P12109 1028 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 MAP2K5Q13163 448 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 KIAA1755Q5JYT7 1200 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 WDR78Q5VTH9 848 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 CEP95Q96GE4 821 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 APBA2Q99767 749 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 VCPKMTQ9H867 229 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 BTBD7Q9P203 1132 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 NYAP2Q9P242 653 aa21.67■■□□□ 1.06
SYNGR3-205ENST00000568896 ZNF213O14771 459 aa21.66■■□□□ 1.06
SYNGR3-205ENST00000568896 PTH1RQ03431 593 aa21.66■■□□□ 1.06
SYNGR3-205ENST00000568896 STAG1Q8WVM7 1258 aa21.66■■□□□ 1.06
SYNGR3-205ENST00000568896 MTMR4Q9NYA4 1195 aa21.66■■□□□ 1.06
SYNGR3-205ENST00000568896 CTNNA3Q9UI47 895 aa21.66■■□□□ 1.06
SYNGR3-205ENST00000568896 COL6A3P12111 3177 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 TSPY2A6NKD2 308 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 RANBP6O60518 1105 aaKnown RBP21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 PTPREP23469 700 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 LRRC26Q2I0M4 334 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 AKNAD1Q5T1N1 836 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 LPAR1Q92633 364 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 RPAP3Q9H6T3 665 aaPredicted RBP21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 TOMM22Q9NS69 142 aa21.65■■□□□ 1.06
SYNGR3-205ENST00000568896 PCP11498 1178 aaKnown RBP21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 CCNA1P78396 465 aa21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 RRP12Q5JTH9 1297 aaKnown RBP21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 MFSD6Q6ZSS7 791 aa21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 SPICE1Q8N0Z3 855 aa21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 SLC17A8Q8NDX2 589 aa21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 ESYT1Q9BSJ8 1104 aa21.64■■□□□ 1.05
SYNGR3-205ENST00000568896 NEDD4P46934 1319 aa21.63■■□□□ 1.05
SYNGR3-205ENST00000568896 SPDYE16A6NNV3 312 aaPredicted RBP21.63■■□□□ 1.05
SYNGR3-205ENST00000568896 NPLOC4Q8TAT6 608 aa21.63■■□□□ 1.05
SYNGR3-205ENST00000568896 RNF41Q9H4P4 317 aaPredicted RBP21.63■■□□□ 1.05
SYNGR3-205ENST00000568896 GOPCQ9HD26 462 aa21.63■■□□□ 1.05
SYNGR3-205ENST00000568896 CLIP2Q9UDT6 1046 aa21.63■■□□□ 1.05
SYNGR3-205ENST00000568896 SLC15A5A6NIM6 579 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 WDR46O15213 610 aaKnown RBP21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 TTLL1O95922 423 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 MFSD14CQ5VZR4 134 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 LBX2Q6XYB7 198 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 Q7L0L9 218 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 TANGO6Q9C0B7 1094 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 UBE2OQ9C0C9 1292 aaKnown RBP21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
SYNGR3-205ENST00000568896 NMT2O60551 498 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms