RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 NMIQ13287 307 aaPredicted RBP8.68□□□□□ -1.02
CYLD-213ENST00000568744 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 TMC3Q7Z5M5 1100 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 PIWIL2Q8TC59 973 aaKnown RBP8.68□□□□□ -1.02
CYLD-213ENST00000568744 NETO1Q8TDF5 533 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 BRF1Q92994 677 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 HSPA12BQ96MM6 686 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 APBA2Q99767 749 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 DSCC1Q9BVC3 393 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 PIF1Q9H611 641 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
CYLD-213ENST00000568744 ANKRD34BA5PLL1 514 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 FAM221BA6H8Z2 402 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 PDPK1O15530 556 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 SUSD5O60279 629 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 ITGA4P13612 1032 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 NKPD1Q17RQ9 610 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 MTERF2Q49AM1 385 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 MKL1Q969V6 931 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 CCDC113Q9H0I3 377 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 ZSWIM5Q9P217 1185 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 PFDN2Q9UHV9 154 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
CYLD-213ENST00000568744 CBFA2T2O43439 604 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 PPM1BO75688 479 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 RASA3Q14644 834 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 IFI16Q16666 785 aaKnown RBP8.66□□□□□ -1.02
CYLD-213ENST00000568744 SPACA3Q8IXA5 215 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 UBE2FQ969M7 185 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 KLHL25Q9H0H3 589 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 TRIT1Q9H3H1 467 aaKnown RBP8.66□□□□□ -1.02
CYLD-213ENST00000568744 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 MSRB2Q9Y3D2 182 aa8.66□□□□□ -1.02
CYLD-213ENST00000568744 TMEM265A0A087WTH1 108 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 SHOXO15266 292 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 PRAMEF1O95521 474 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 NOL6Q9H6R4 1146 aaKnown RBP8.65□□□□□ -1.02
CYLD-213ENST00000568744 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 WHRNQ9P202 907 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 SUSD2Q9UGT4 822 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 MINPP1Q9UNW1 487 aa8.65□□□□□ -1.02
CYLD-213ENST00000568744 SHISA3A0PJX4 238 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 AGRPO00253 132 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 SIGLEC6O43699 453 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 COBLO75128 1261 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 SSTR4P31391 388 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 CLCN7P51798 805 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 ZNF445P59923 1031 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 LRRN4CLQ8ND94 238 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 CWC22Q9HCG8 908 aaKnown RBP8.64□□□□□ -1.03
CYLD-213ENST00000568744 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 ST14Q9Y5Y6 855 aa8.64□□□□□ -1.03
CYLD-213ENST00000568744 WASH4PA8MWX3 477 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 NOP56O00567 594 aaKnown RBP8.63□□□□□ -1.03
CYLD-213ENST00000568744 TPP2P29144 1249 aaPredicted RBP8.63□□□□□ -1.03
CYLD-213ENST00000568744 ZNF143P52747 638 aaPredicted RBP8.63□□□□□ -1.03
CYLD-213ENST00000568744 SLC10A6Q3KNW5 377 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 HRASLS5Q96KN8 279 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 ZDHHC15Q96MV8 337 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 DNAJC7Q99615 494 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 GPR62Q9BZJ7 368 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 DUSP15Q9H1R2 295 aaPredicted RBP8.63□□□□□ -1.03
CYLD-213ENST00000568744 AKT3Q9Y243 479 aa8.63□□□□□ -1.03
CYLD-213ENST00000568744 SSRP1Q08945 709 aaKnown RBP8.62□□□□□ -1.03
CYLD-213ENST00000568744 AOC3Q16853 763 aa8.62□□□□□ -1.03
CYLD-213ENST00000568744 INTS5Q6P9B9 1019 aaKnown RBP8.62□□□□□ -1.03
CYLD-213ENST00000568744 SPATC1Q76KD6 591 aa8.62□□□□□ -1.03
CYLD-213ENST00000568744 LRP10Q7Z4F1 713 aa8.62□□□□□ -1.03
CYLD-213ENST00000568744 ST13P5Q8NFI4 369 aaPredicted RBP8.62□□□□□ -1.03
CYLD-213ENST00000568744 LGR4Q9BXB1 951 aa8.62□□□□□ -1.03
CYLD-213ENST00000568744 EPN3Q9H201 632 aa8.62□□□□□ -1.03
CYLD-213ENST00000568744 FHOD1Q9Y613 1164 aa8.62□□□□□ -1.03
CYLD-213ENST00000568744 SSU72P8A0A1W2PR75 194 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 IQCA1LA6NCM1 817 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 LTKP29376 864 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 CREG2Q8IUH2 290 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 ATP13A1Q9HD20 1204 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 RNF112Q9ULX5 631 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 SF3B6Q9Y3B4 125 aaKnown RBP8.61□□□□□ -1.03
CYLD-213ENST00000568744 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
CYLD-213ENST00000568744 KDM2BQ8NHM5 1336 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 BNIP3Q12983 259 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 CWF19L1Q69YN2 538 aaKnown RBP8.6□□□□□ -1.03
CYLD-213ENST00000568744 THAP5Q7Z6K1 395 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
CYLD-213ENST00000568744 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
CYLD-213ENST00000568744 BVESQ8NE79 360 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 ENOX1Q8TC92 643 aaKnown RBP8.6□□□□□ -1.03
CYLD-213ENST00000568744 SYTL5Q8TDW5 730 aaPredicted RBP8.6□□□□□ -1.03
CYLD-213ENST00000568744 TCTN2Q96GX1 697 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 HDAC8Q9BY41 377 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 SEMA3GQ9NS98 782 aa8.6□□□□□ -1.03
CYLD-213ENST00000568744 BSDC1Q9NW68 430 aaPredicted RBP8.6□□□□□ -1.03
CYLD-213ENST00000568744 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms